Factsheet for VIT_14s0030g00440.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_01s0011g05260.t01
VIT_14s0006g00640.t01
VIT_18s0001g09700.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G05120.1	VIT_01s0011g05260.t01	AT1G14920.1	16709201
AT3G05120.1	VIT_01s0011g05260.t01	AT1G14920.1	17194763
AT3G05120.1	VIT_01s0011g05260.t01	AT1G14920.1	17416730
AT3G05120.1	VIT_01s0011g05260.t01	AT1G14920.1	18827182
AT3G05120.1	VIT_01s0011g05260.t01	AT1G14920.1	19500306
AT3G05120.1	VIT_14s0006g00640.t01	AT1G66350.1	16709201
AT3G05120.1	VIT_14s0006g00640.t01	AT1G66350.1	19500306
AT3G05120.1	VIT_01s0011g05260.t01	AT2G01570.1	16709201
AT3G05120.1	VIT_01s0011g05260.t01	AT2G01570.1	17194763
AT3G05120.1	VIT_01s0011g05260.t01	AT2G01570.1	17416730
AT3G05120.1	VIT_01s0011g05260.t01	AT2G01570.1	19500306
AT3G05120.1	VIT_14s0006g00640.t01	AT3G03450.1	16709201
AT3G05120.1	VIT_14s0006g00640.t01	AT3G03450.1	19500306
AT3G05120.1	VIT_18s0001g09700.t01	AT4G24210.1	16709201
AT3G05120.1	VIT_18s0001g09700.t01	AT4G24210.1	19500306
AT5G27320.1	VIT_01s0011g05260.t01	AT1G14920.1	16709201
AT5G27320.1	VIT_01s0011g05260.t01	AT1G14920.1	17194763
AT5G27320.1	VIT_01s0011g05260.t01	AT1G14920.1	18827182
AT5G27320.1	VIT_01s0011g05260.t01	AT1G14920.1	19500306
AT5G27320.1	VIT_14s0006g00640.t01	AT1G66350.1	16709201
AT5G27320.1	VIT_14s0006g00640.t01	AT1G66350.1	19500306
AT5G27320.1	VIT_01s0011g05260.t01	AT2G01570.1	16709201
AT5G27320.1	VIT_01s0011g05260.t01	AT2G01570.1	17194763
AT5G27320.1	VIT_01s0011g05260.t01	AT2G01570.1	19500306
AT5G27320.1	VIT_14s0006g00640.t01	AT3G03450.1	16709201
AT5G27320.1	VIT_14s0006g00640.t01	AT3G03450.1	19500306
AT5G27320.1	VIT_18s0001g09700.t01	AT4G24210.1	19500306

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073501	Potato	cytosol	75.6	81.9
AT5G27320.1	Thale cress	cytosol	74.54	81.69
Solyc01g098390.2.1	Tomato	cytosol	75.33	81.38
KRH33997	Soybean	cytosol	73.74	80.81
KRG92803	Soybean	cytosol	73.74	80.81
AT3G05120.1	Thale cress	cytosol	73.74	80.58
CDX80665	Canola	cytosol	73.21	80.23
Bra009970.1-P	Field mustard	cytosol	73.21	80.0
CDY16687	Canola	cytosol	72.94	79.71
VIT_07s0104g00930.t01	Wine grape	cytosol	72.68	79.65
CDY41936	Canola	cytosol	69.76	75.79
CDY27795	Canola	cytosol	69.23	75.43
GSMUA_Achr3P24930_001	Banana	cytosol	57.82	71.24
GSMUA_Achr8P05910_001	Banana	cytosol	57.03	70.49
GSMUA_Achr5P27430_001	Banana	cytosol	56.76	69.48
GSMUA_Achr10P...	Banana	cytosol	57.03	69.35
GSMUA_Achr6P16090_001	Banana	cytosol	54.91	67.43
Bra039460.1-P	Field mustard	cytosol	69.76	66.41
GSMUA_Achr5P27450_001	Banana	mitochondrion	57.03	63.61
HORVU1Hr1G060810.1	Barley	cytosol	57.82	61.58
Os05t0407500-01	Rice	cytosol, nucleus	57.82	61.58
Zm00001d038165_P003	Maize	cytosol	57.29	61.54
TraesCS1B01G265900.1	Wheat	cytosol	57.82	61.41
Zm00001d010308_P001	Maize	cytosol, plastid	56.76	61.14
KXG21982	Sorghum	cytosol	57.56	61.13
TraesCS1D01G254500.1	Wheat	cytosol	57.29	61.02
TraesCS1A01G255100.1	Wheat	cytosol	57.29	60.85
VIT_18s0089g00390.t01	Wine grape	endoplasmic reticulum, mitochondrion, plastid	33.69	39.69
VIT_18s0089g00400.t01	Wine grape	mitochondrion	35.28	39.23
VIT_07s0130g00320.t01	Wine grape	plastid	34.75	39.1
VIT_18s0089g00370.t01	Wine grape	cytosol	34.22	39.09
VIT_07s0130g00340.t01	Wine grape	plastid	34.48	38.81
VIT_18s0089g00380.t01	Wine grape	mitochondrion	33.69	38.6
VIT_04s0008g05390.t01	Wine grape	cytosol	25.99	31.61
VIT_04s0008g05350.t01	Wine grape	cytosol	25.2	30.65
VIT_04s0008g05360.t01	Wine grape	cytosol, plastid	25.2	30.55
VIT_16s0022g02430.t01	Wine grape	cytosol	17.51	30.41
VIT_16s0022g02300.t01	Wine grape	cytosol	23.34	29.83
VIT_06s0009g00980.t01	Wine grape	cytosol	24.67	29.34
VIT_15s0048g01390.t01	Wine grape	plastid	25.99	29.17
VIT_08s0040g00810.t01	Wine grape	cytosol	26.53	28.99
VIT_13s0084g00130.t01	Wine grape	cytosol	25.73	28.87
VIT_16s0100g00010.t01	Wine grape	cytosol	24.93	28.83
VIT_04s0008g05370.t01	Wine grape	cytosol	23.61	28.71
VIT_04s0008g05400.t01	Wine grape	cytosol	23.61	28.71
VIT_08s0040g00960.t01	Wine grape	cytosol	25.46	28.66
VIT_08s0032g00700.t01	Wine grape	cytosol	23.87	28.39
VIT_15s0048g01350.t01	Wine grape	cytosol	24.93	28.06
VIT_04s0008g05410.t01	Wine grape	cytosol	22.81	27.83
VIT_16s0022g02440.t01	Wine grape	cytosol	14.85	27.72
VIT_01s0011g03270.t01	Wine grape	cytosol	25.73	27.4
VIT_14s0006g03180.t01	Wine grape	cytosol	24.4	26.9
VIT_04s0008g05380.t01	Wine grape	cytosol	22.02	26.86
VIT_08s0032g00510.t01	Wine grape	cytosol	23.08	26.77

Protein Annotations

MapMan:11.6.2.1	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	ProteinID:AFG17072	ProteinID:AFG17072.1
EMBL:AM468374	ProteinID:CAN65915	ProteinID:CAN65915.1	ProteinID:CCB58159	ProteinID:CCB58159.1	UniProt:F6HTZ8
EMBL:FN596249	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005975	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009056
GO:GO:0009058	GO:GO:0009653	GO:GO:0009719	GO:GO:0009791	GO:GO:0009908	GO:GO:0009939
GO:GO:0009987	GO:GO:0010325	GO:GO:0010331	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016788	GO:GO:0048444	InterPro:IPR029058	EMBL:JQ669511	InterPro:Lipase_GDXG_HIS_AS	PFAM:PF07859
ScanProsite:PS01173	PANTHER:PTHR23024	PANTHER:PTHR23024:SF227	SUPFAM:SSF53474	TIGR:TC67464	UniParc:UPI000210806C
ArrayExpress:VIT_14s0030g00440	EnsemblPlantsGene:VIT_14s0030g00440	EnsemblPlants:VIT_14s0030g00440.t01	unigene:Vvi.2909	:	:

Description

No Description!

Coordinates

chr14:-:4293950..4298048

Molecular Weight (calculated)

42256.3 Da

IEP (calculated)

6.115

GRAVY (calculated)

-0.182

Length

377 amino acids

Sequence
(BLAST)

001: MAGSNEVNLS ESKRVVPLNT WILISNFKLA YNLLRRPDGT FNRHLAEFLD RKVPANANPV EGVFSFDVII DRSTSLLSRI YRPATGEEAL PSIMELEKPV
101: TGDIVPVILF FHGGSFAHSS ANSAIYDTLC RRLVGICKAV VVSVNYRRAP ENPYPCAYDD GWAALKWVNS RPWLKSEEDS KVHIYMVGDS SGGNIVHNVA
201: LKAVESGIEV LGNILLNPMF GGQERTESEK RLDGKYFVTI QDRDWYWRAF LPEGEDRDHA ACNPFGPNGK SLVGMKFPKS LVVVAGLDLV QDWQLAYVEG
301: LKKAGQEVKH LYLDKATIGF YLLPNNDHFY TVMDEISNFV SSNYVEDDKF GEIGNGDKCK NWLVLKALIG GWSFGWY

Best Arabidopsis Sequence Match ( AT5G27320.1 )
(BLAST)

001: MAGSEEVNLI ESKTVVPLNT WVLISNFKLA YNLLRRPDGT FNRHLAEFLD RKVPANANPV NGVFSFDVII DRQTNLLSRV YRPADAGTSP SITDLQNPVD
101: GEIVPVIVFF HGGSFAHSSA NSAIYDTLCR RLVGLCGAVV VSVNYRRAPE NRYPCAYDDG WAVLKWVNSS SWLRSKKDSK VRIFLAGDSS GGNIVHNVAV
201: RAVESRIDVL GNILLNPMFG GTERTESEKR LDGKYFVTVR DRDWYWRAFL PEGEDREHPA CSPFGPRSKS LEGLSFPKSL VVVAGLDLIQ DWQLKYAEGL
301: KKAGQEVKLL YLEQATIGFY LLPNNNHFHT VMDEIAAFVN AECQ

Arabidopsis Description

GID1CGID1C [Source:UniProtKB/TrEMBL;Acc:A0A178UKX0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.