Factsheet for VIT_14s0006g03180.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 2
nucleus 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_03s0017g00210.t01
VIT_16s0115g00130.t01
VIT_19s0027g01340.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G16080.1	VIT_03s0017g00210.t01	AT3G08530.1	21798944
AT5G16080.1	VIT_16s0115g00130.t01	AT3G08530.1	21798944
AT5G16080.1	VIT_19s0027g01340.t01	AT3G08530.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01780	Soybean	cytosol	67.25	67.65
VIT_01s0011g03270.t01	Wine grape	cytosol	67.25	64.97
KRH46912	Soybean	cytosol	68.13	64.36
PGSC0003DMT400033010	Potato	cytosol	59.94	61.93
GSMUA_Achr6P16980_001	Banana	mitochondrion	51.46	59.46
GSMUA_Achr10P...	Banana	cytosol	50.0	57.97
Solyc02g085800.1.1	Tomato	cytosol	57.6	57.43
TraesCS4D01G219100.1	Wheat	mitochondrion	59.65	56.82
TraesCS4B01G218900.1	Wheat	mitochondrion	58.48	55.87
HORVU4Hr1G062060.1	Barley	mitochondrion	57.31	55.68
TraesCS4A01G085300.1	Wheat	mitochondrion	58.19	55.28
CDY70129	Canola	cytosol	53.8	55.26
Bra008651.1-P	Field mustard	cytosol	52.34	53.92
CDX69476	Canola	cytosol	52.34	53.92
Os03t0258200-01	Rice	mitochondrion	57.02	53.13
EER95156	Sorghum	mitochondrion	57.31	52.69
AT5G16080.1	Thale cress	cytosol	52.34	52.03
Zm00001d047883_P001	Maize	mitochondrion	56.14	51.89
VIT_08s0032g00510.t01	Wine grape	cytosol	35.09	36.92
VIT_04s0008g05360.t01	Wine grape	cytosol, plastid	33.33	36.66
VIT_06s0009g00980.t01	Wine grape	cytosol	33.92	36.59
VIT_08s0032g00700.t01	Wine grape	cytosol	33.63	36.28
VIT_16s0022g02430.t01	Wine grape	cytosol	22.81	35.94
VIT_08s0040g00960.t01	Wine grape	cytosol	35.09	35.82
VIT_04s0008g05350.t01	Wine grape	cytosol	32.46	35.81
VIT_04s0008g05410.t01	Wine grape	cytosol	32.16	35.6
VIT_04s0008g05380.t01	Wine grape	cytosol	32.16	35.6
VIT_04s0008g05390.t01	Wine grape	cytosol	32.16	35.48
VIT_04s0008g05400.t01	Wine grape	cytosol	31.87	35.16
VIT_04s0008g05370.t01	Wine grape	cytosol	31.58	34.84
VIT_13s0084g00130.t01	Wine grape	cytosol	33.92	34.52
VIT_16s0022g02440.t01	Wine grape	cytosol	20.18	34.16
VIT_16s0022g02300.t01	Wine grape	cytosol	28.66	33.22
VIT_16s0100g00010.t01	Wine grape	cytosol	31.29	32.82
VIT_08s0040g00810.t01	Wine grape	cytosol	32.75	32.46
VIT_07s0130g00320.t01	Wine grape	plastid	31.29	31.94
VIT_15s0048g01390.t01	Wine grape	plastid	31.29	31.85
VIT_18s0089g00380.t01	Wine grape	mitochondrion	30.12	31.31
VIT_15s0048g01350.t01	Wine grape	cytosol	30.41	31.04
VIT_18s0089g00370.t01	Wine grape	cytosol	29.53	30.61
VIT_07s0130g00340.t01	Wine grape	plastid	29.82	30.45
VIT_18s0089g00390.t01	Wine grape	endoplasmic reticulum, mitochondrion, plastid	28.07	30.0
VIT_18s0089g00400.t01	Wine grape	mitochondrion	28.07	28.32
VIT_07s0104g00930.t01	Wine grape	cytosol	27.19	27.03
VIT_14s0030g00440.t01	Wine grape	cytosol	26.9	24.4

Protein Annotations

EntrezGene:100241294	wikigene:100241294	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3
ProteinID:CCB57728	ProteinID:CCB57728.1	UniProt:F6HSF1	EMBL:FN596245	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	InterPro:IPR029058	EntrezGene:LOC100241294
wikigene:LOC100241294	PFAM:PF07859	PANTHER:PTHR23024	PANTHER:PTHR23024:SF250	SUPFAM:SSF53474	UniParc:UPI00015C84D1
ArrayExpress:VIT_14s0006g03180	EnsemblPlantsGene:VIT_14s0006g03180	EnsemblPlants:VIT_14s0006g03180.t01	RefSeq:XP_002279965	RefSeq:XP_002279965.1	:

Description

No Description!

Coordinates

chr14:-:21742614..21743660

Molecular Weight (calculated)

37300.0 Da

IEP (calculated)

8.539

GRAVY (calculated)

-0.030

Length

342 amino acids

Sequence
(BLAST)

001: MAAISLDPRL SLQMGKNLYQ NGVVVEKVEG LIRVYNDGHV ERPAIVPNVP CTVALELGVT VKDVVIEKYS NLWARFYVPS CPAGKLPLLV YFHGGGFCVG
101: SAAWNCYHGF LADLASKAGC LIMSVNYRLA PENRLPAAYE DGFNAVMWVK NQALNGAGEQ KWWLSRCNLS SLFLTGDSAG ANIAYNVATR LGSSDTTFLK
201: PLSLKGTILI QPFFGGEART GSENHSTQPP NSALTLSASD TYWRLSLPLG ANRDHPCCNP LANGSTKLRT LQLPPTMVCI SDTDILKDRN LQFCTAMANA
301: GKRLETVIYK GVGHAFQVLQ NSDLSQPRTK EMISHIRAFI TQ

Best Arabidopsis Sequence Match ( AT5G16080.1 )
(BLAST)

001: MATISFSHNH QSSDNRRGGS HHHRHGPVVE EIEGLIKVFN DGCVERPPIV PIVSPTIHPS SKATAFDIKL SNDTWTRVYI PDAAAASPSV TLPLLVYFHG
101: GGFCVGSAAW SCYHDFLTSL AVKARCVIVS VNYRLAPEHR LPAAYDDGVN VVSWLVKQQI STGGGYPSWL SKCNLSNVFL AGDSAGANIA YQVAVRIMAS
201: GKYANTLHLK GIILIHPFFG GESRTSSEKQ QHHTKSSALT LSASDAYWRL ALPRGASRDH PWCNPLMSSA GAKLPTTMVF MAEFDILKER NLEMCKVMRS
301: HGKRVEGIVH GGVGHAFHIL DNSSVSRDRI HDMMCRLHNF IHPS

Arabidopsis Description

CXE17Probable carboxylesterase 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFR7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.