Factsheet for PGSC0003DMT400033010

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g085800.1.1	Tomato	cytosol	87.61	84.55
VIT_14s0006g03180.t01	Wine grape	cytosol	61.93	59.94
KRH01780	Soybean	cytosol	56.5	55.0
CDY70129	Canola	cytosol	54.38	54.05
PGSC0003DMT400033749	Potato	cytosol	56.19	53.76
CDX69476	Canola	cytosol	53.47	53.31
Bra008651.1-P	Field mustard	cytosol	53.47	53.31
AT5G16080.1	Thale cress	cytosol	55.29	53.2
KRH46912	Soybean	cytosol	56.5	51.66
TraesCS4D01G219100.1	Wheat	mitochondrion	55.59	51.25
GSMUA_Achr10P...	Banana	cytosol	45.62	51.19
HORVU4Hr1G062060.1	Barley	mitochondrion	54.38	51.14
TraesCS4B01G218900.1	Wheat	mitochondrion	55.29	51.12
GSMUA_Achr6P16980_001	Banana	mitochondrion	45.32	50.68
TraesCS4A01G085300.1	Wheat	mitochondrion	54.38	50.0
Os03t0258200-01	Rice	mitochondrion	54.38	49.05
Zm00001d047883_P001	Maize	mitochondrion	53.17	47.57
EER95156	Sorghum	mitochondrion	53.17	47.31
PGSC0003DMT400007788	Potato	cytosol	33.84	34.78
PGSC0003DMT400022327	Potato	cytosol	25.38	34.01
PGSC0003DMT400040972	Potato	cytosol	31.72	33.65
PGSC0003DMT400017198	Potato	cytosol	32.33	33.02
PGSC0003DMT400057919	Potato	cytosol	32.02	32.42
PGSC0003DMT400057917	Potato	cytosol	31.72	32.01
PGSC0003DMT400017199	Potato	mitochondrion	32.02	31.93
PGSC0003DMT400054431	Potato	cytosol	31.42	31.04
PGSC0003DMT400000390	Potato	cytosol	31.72	30.97
PGSC0003DMT400033220	Potato	cytosol	29.0	30.0
PGSC0003DMT400050566	Potato	cytosol	28.1	28.53
PGSC0003DMT400071863	Potato	cytosol	28.1	28.53
PGSC0003DMT400048357	Potato	cytosol	28.1	28.44
PGSC0003DMT400056562	Potato	cytosol	29.61	28.41
PGSC0003DMT400009831	Potato	cytosol	29.61	28.41
PGSC0003DMT400073501	Potato	cytosol	29.0	27.59

Protein Annotations

EntrezGene:102587673	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:IPR029058	InterPro:Lipase_GDXG_put_SER_AS
UniProt:M1AYG2	PFAM:PF07859	EnsemblPlantsGene:PGSC0003DMG400012674	PGSC:PGSC0003DMG400012674	EnsemblPlants:PGSC0003DMT400033010	ScanProsite:PS01174
PANTHER:PTHR23024	PANTHER:PTHR23024:SF93	MEROPS:S09.A15	SUPFAM:SSF53474	UniParc:UPI000294ABFD	RefSeq:XP_006363152.1

Description

Lipase [Source:PGSC_GENE;Acc:PGSC0003DMG400012674]

Coordinates

chr2:+:41005579..41006732

Molecular Weight (calculated)

37232.1 Da

IEP (calculated)

9.407

GRAVY (calculated)

-0.180

Length

331 amino acids

Sequence
(BLAST)

001: MVTAISYDPR QNLNLRKDHG IVVVEEIEGL IKIYNNGHIE RPPIVPNVPP NSLPHVTSKD VIFHNPTNLW SRIYLPTNNN PSKKLPLLIY FHGGGFSVGS
101: AAWKCYHDFL STLASKIGVV IMSVNYRLAP ENRLPAAYDD GFHAITWLKN QAMVNSKEQN WWSSKCNFSI MFISGDSAGA NIAFHVAIRL NNMKPLCLKG
201: VILIQPFFGG ESRTQSEKYS VQPPYSALNL SASDTYWRIA LPVGSNRDHP WCKPRLSSMK FPSVLMCISE MDILKDRNLE MCGVLGDAGI KVEKHVYKGV
301: GHAFHILHNS PLSQPRTQDM MSHLKAFIYN Q

Best Arabidopsis Sequence Match ( AT5G16080.1 )
(BLAST)

001: MATISFSHNH QSSDNRRGGS HHHRHGPVVE EIEGLIKVFN DGCVERPPIV PIVSPTIHPS SKATAFDIKL SNDTWTRVYI PDAAAASPSV TLPLLVYFHG
101: GGFCVGSAAW SCYHDFLTSL AVKARCVIVS VNYRLAPEHR LPAAYDDGVN VVSWLVKQQI STGGGYPSWL SKCNLSNVFL AGDSAGANIA YQVAVRIMAS
201: GKYANTLHLK GIILIHPFFG GESRTSSEKQ QHHTKSSALT LSASDAYWRL ALPRGASRDH PWCNPLMSSA GAKLPTTMVF MAEFDILKER NLEMCKVMRS
301: HGKRVEGIVH GGVGHAFHIL DNSSVSRDRI HDMMCRLHNF IHPS

Arabidopsis Description

CXE17Probable carboxylesterase 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFR7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.