Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69476 | Canola | cytosol | 95.8 | 96.08 |
| AT5G16080.1 | Thale cress | cytosol | 87.09 | 84.3 |
| KRH01780 | Soybean | cytosol | 55.86 | 54.71 |
| PGSC0003DMT400033010 | Potato | cytosol | 54.05 | 54.38 |
| GSMUA_Achr6P16980_001 | Banana | mitochondrion | 48.05 | 54.05 |
| VIT_14s0006g03180.t01 | Wine grape | cytosol | 55.26 | 53.8 |
| GSMUA_Achr10P... | Banana | cytosol | 47.45 | 53.56 |
| KRH46912 | Soybean | cytosol | 56.46 | 51.93 |
| Solyc02g085800.1.1 | Tomato | cytosol | 53.15 | 51.6 |
| HORVU4Hr1G062060.1 | Barley | mitochondrion | 48.95 | 46.31 |
| Os03t0258200-01 | Rice | mitochondrion | 50.15 | 45.5 |
| TraesCS4D01G219100.1 | Wheat | mitochondrion | 48.95 | 45.4 |
| TraesCS4B01G218900.1 | Wheat | mitochondrion | 48.65 | 45.25 |
| EER95156 | Sorghum | mitochondrion | 50.45 | 45.16 |
| TraesCS4A01G085300.1 | Wheat | mitochondrion | 48.05 | 44.44 |
| Zm00001d047883_P001 | Maize | mitochondrion | 48.65 | 43.78 |
| CDX87235 | Canola | cytosol, nucleus, plastid | 25.83 | 33.33 |
| CDY16790 | Canola | cytosol | 32.73 | 33.23 |
| CDY30708 | Canola | cytosol | 27.03 | 32.61 |
| CDX87169 | Canola | cytosol | 32.13 | 31.94 |
| CDY16855 | Canola | cytosol | 31.83 | 31.64 |
| CDX88032 | Canola | cytosol | 31.83 | 31.64 |
| CDX80370 | Canola | cytosol | 31.53 | 31.34 |
| CDY55764 | Canola | cytosol | 21.92 | 31.2 |
| CDX81008 | Canola | cytosol | 30.63 | 30.54 |
| CDX74751 | Canola | cytosol | 28.83 | 30.19 |
| CDX70090 | Canola | cytosol | 29.73 | 29.82 |
| CDX98936 | Canola | cytosol | 29.43 | 29.52 |
| CDY18915 | Canola | cytosol | 28.83 | 29.45 |
| CDY63333 | Canola | cytosol | 30.63 | 28.49 |
| CDY67478 | Canola | cytosol | 30.33 | 28.21 |
| CDX89165 | Canola | cytosol | 30.33 | 28.06 |
| CDX67913 | Canola | cytosol | 30.03 | 27.93 |
| CDX80665 | Canola | cytosol | 28.83 | 27.91 |
| CDY16687 | Canola | cytosol | 28.53 | 27.54 |
| CDX93945 | Canola | extracellular, golgi | 29.43 | 27.53 |
| CDY27795 | Canola | cytosol | 28.53 | 27.46 |
| CDY41936 | Canola | cytosol | 28.53 | 27.38 |
| CDY70667 | Canola | cytosol | 29.43 | 27.37 |
| CDY18914 | Canola | cytosol | 25.83 | 26.54 |
| CDX74752 | Canola | cytosol | 25.83 | 26.54 |
Protein Annotations
| EnsemblPlants:CDY70129 | EnsemblPlantsGene:GSBRNA2T00096572001 | Gene3D:3.40.50.1820 | GO:A0A078JTH1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_3 | InterPro:IPR029058 |
| InterPro:Lipase_GDXG_put_SER_AS | PANTHER:PTHR23024 | PANTHER:PTHR23024:SF93 | PFAM:PF07859 | ProteinID:CDY70129 | ProteinID:CDY70129.1 |
| ScanProsite:PS01174 | SUPFAM:SSF53474 | UniParc:UPI0004EDACBC | UniProt:A0A078JTH1 | MapMan:35.1 | : |
Description
BnaCnng66860DBnaCnng66860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JTH1]
Coordinates
chrLK041252:-:1488..2617
Molecular Weight (calculated)
36707.9 Da
IEP (calculated)
8.842
GRAVY (calculated)
-0.136
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALSFTHNH QPSDNRRGGS HNHRHGPIVE EIEGLIKVFN DGCVERPPIV PTVSATVHPS AKVTAFDIKL SNDTWARAYI PDAAAFSPSV TLPLLVYFHG
101: GGFCVGSAAW SCYHDFLTDL AVTARCVIVS VNYRLAPEHR LPAAYDDGVN VVSWLMKQGS NGGYSWVSKC DLSNLFLAGD SAGANIAYQV ALKITNTSKN
201: LKGVILIHPF FGGEARTFSE KQQQSKSSAL TLSASDTYWR LALPRGASRD HPWCNPLVSS SARLPTTMVF MAEFDILKDR NMEMCKVMRS HGKRVEGIIH
301: GGVGHAFHIL DKSSVSRDRI HDMMYRLRNF IHP
101: GGFCVGSAAW SCYHDFLTDL AVTARCVIVS VNYRLAPEHR LPAAYDDGVN VVSWLMKQGS NGGYSWVSKC DLSNLFLAGD SAGANIAYQV ALKITNTSKN
201: LKGVILIHPF FGGEARTFSE KQQQSKSSAL TLSASDTYWR LALPRGASRD HPWCNPLVSS SARLPTTMVF MAEFDILKDR NMEMCKVMRS HGKRVEGIIH
301: GGVGHAFHIL DKSSVSRDRI HDMMYRLRNF IHP
001: MATISFSHNH QSSDNRRGGS HHHRHGPVVE EIEGLIKVFN DGCVERPPIV PIVSPTIHPS SKATAFDIKL SNDTWTRVYI PDAAAASPSV TLPLLVYFHG
101: GGFCVGSAAW SCYHDFLTSL AVKARCVIVS VNYRLAPEHR LPAAYDDGVN VVSWLVKQQI STGGGYPSWL SKCNLSNVFL AGDSAGANIA YQVAVRIMAS
201: GKYANTLHLK GIILIHPFFG GESRTSSEKQ QHHTKSSALT LSASDAYWRL ALPRGASRDH PWCNPLMSSA GAKLPTTMVF MAEFDILKER NLEMCKVMRS
301: HGKRVEGIVH GGVGHAFHIL DNSSVSRDRI HDMMCRLHNF IHPS
101: GGFCVGSAAW SCYHDFLTSL AVKARCVIVS VNYRLAPEHR LPAAYDDGVN VVSWLVKQQI STGGGYPSWL SKCNLSNVFL AGDSAGANIA YQVAVRIMAS
201: GKYANTLHLK GIILIHPFFG GESRTSSEKQ QHHTKSSALT LSASDAYWRL ALPRGASRDH PWCNPLMSSA GAKLPTTMVF MAEFDILKER NLEMCKVMRS
301: HGKRVEGIVH GGVGHAFHIL DNSSVSRDRI HDMMCRLHNF IHPS
Arabidopsis Description
CXE17Probable carboxylesterase 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFR7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.