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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G021800.1
HORVU1Hr1G092980.14
HORVU3Hr1G055550.3
HORVU3Hr1G066410.6
HORVU4Hr1G024710.4
HORVU5Hr1G048010.1
HORVU7Hr1G082720.10

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G16080.1 HORVU4Hr1G024710.4 AT3G08530.1 21798944
AT5G16080.1 HORVU5Hr1G048010.1 AT3G08530.1 21798944
AT5G16080.1 HORVU3Hr1G066410.6 AT4G00980.1 21798944
AT5G16080.1 HORVU0Hr1G021800.1 AT4G01090.1 21798944
AT5G16080.1 HORVU1Hr1G092980.14 AT4G01090.1 21798944
AT5G16080.1 HORVU3Hr1G055550.3 AT4G01090.1 21798944
AT5G16080.1 HORVU7Hr1G082720.10 AT4G01090.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G219100.1 Wheat mitochondrion 97.73 95.82
TraesCS4B01G218900.1 Wheat mitochondrion 96.02 94.41
TraesCS4A01G085300.1 Wheat mitochondrion 96.31 94.17
Os03t0258200-01 Rice mitochondrion 82.95 79.56
EER95156 Sorghum mitochondrion 82.39 77.96
Zm00001d047883_P001 Maize mitochondrion 80.97 77.03
GSMUA_Achr6P16980_001 Banana mitochondrion 57.95 68.92
GSMUA_Achr10P... Banana cytosol 55.11 65.76
VIT_14s0006g03180.t01 Wine grape cytosol 55.68 57.31
PGSC0003DMT400033010 Potato cytosol 51.14 54.38
KRG90787 Soybean cytosol, mitochondrion 54.26 54.26
KRH01780 Soybean cytosol 51.99 53.82
VIT_01s0011g03270.t01 Wine grape cytosol 53.98 53.67
KRH35975 Soybean cytosol 46.88 52.22
Solyc02g085800.1.1 Tomato cytosol 50.0 51.31
KRH46912 Soybean cytosol 51.7 50.28
CDY70129 Canola cytosol 46.31 48.95
CDX69476 Canola cytosol 45.17 47.89
Bra008651.1-P Field mustard cytosol 45.17 47.89
PGSC0003DMT400033749 Potato cytosol 46.88 47.69
Bra004026.1-P Field mustard cytosol 44.32 47.56
Solyc05g009610.1.1 Tomato cytosol 46.31 47.25
AT5G16080.1 Thale cress cytosol 46.02 47.09
Bra038363.1-P Field mustard cytosol 44.03 45.99
Bra027693.1-P Field mustard cytosol 44.03 45.99
Bra004327.1-P Field mustard cytosol 43.47 45.81
Bra004326.1-P Field mustard cytosol 43.47 45.81
AT1G68620.1 Thale cress cytosol 42.61 44.64
HORVU2Hr1G079270.1 Barley cytosol 34.09 36.7
HORVU6Hr1G077260.1 Barley cytosol 35.51 35.41
HORVU5Hr1G103770.1 Barley cytosol 33.81 35.31
HORVU1Hr1G063380.1 Barley plastid 35.8 35.1
HORVU4Hr1G062730.1 Barley peroxisome 32.67 35.06
HORVU6Hr1G090630.1 Barley cytosol, plastid 34.94 35.04
HORVU3Hr1G024890.2 Barley cytosol 33.24 34.93
HORVU7Hr1G057260.1 Barley cytosol 34.94 34.84
HORVU1Hr1G063450.1 Barley plastid 35.23 34.54
HORVU7Hr1G097660.1 Barley cytosol 32.39 34.23
HORVU3Hr1G024660.1 Barley cytosol 34.09 33.61
HORVU4Hr1G015550.1 Barley mitochondrion 32.39 33.43
HORVU1Hr1G060810.1 Barley cytosol 29.26 29.1
HORVU1Hr1G037570.2 Barley cytosol, mitochondrion, peroxisome 28.98 28.81
HORVU0Hr1G022260.2 Barley mitochondrion 30.68 28.65
HORVU4Hr1G015560.1 Barley plastid 31.53 28.24
HORVU2Hr1G025390.1 Barley mitochondrion 26.42 26.57
HORVU2Hr1G025230.1 Barley cytosol, plastid 25.28 25.72
HORVU2Hr1G032290.4 Barley plastid 21.31 24.43
HORVU2Hr1G025360.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 14.77 22.91
HORVU2Hr1G025290.1 Barley cytosol, plastid 16.76 17.05
HORVU2Hr1G025380.7 Barley cytosol 17.33 16.58
HORVU1Hr1G037610.1 Barley plastid 17.33 16.49
Protein Annotations
EnsemblPlants:HORVU4Hr1G062060.1EnsemblPlantsGene:HORVU4Hr1G062060Gene3D:3.40.50.1820GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:AB_hydrolaseInterPro:AB_hydrolase_3InterPro:IPR029058PANTHER:PTHR23024
PANTHER:PTHR23024:SF93PFAM:PF07859SEG:segSUPFAM:SSF53474UniParc:UPI000B47FA83UniProt:A0A287PB51
MapMan:35.1:::::
Description
No Description!
Coordinates
chrchr4H:+:521173576..521175354
Molecular Weight (calculated)
37715.3 Da
IEP (calculated)
9.866
GRAVY (calculated)
-0.035
Length
352 amino acids
Sequence
(BLAST)
001: MIRRRMGALH VGEPRVSFQQ QVGKNGGGHG AVVEEIHGLI RVYKDGHVER LPAIPDVPCT WGSTAAASGV LARDVAVDRA TGVWARLYAP AAAAGKVPVV
101: VYLHGGGFSV GSAAWSCYHE FLAQLPARAG CAVMSVDYRL APENRLPAAF DDGLTALRWL RQQASRGAAA SDEVSWWRSR CRFDRVFLMG DSAGAAIAFH
201: VAARAPAPLA VKGAVLIQPF FGGEARTASE KSMPQPPGSA LSLSTSDSYW RMALPAGAGR DHPWCNPLAR GAPRLESLAL PPMLVCISEA DILRDRNLEL
301: CRALRKAGKS VEQATYGGVG HAFQVLHNCH LSRPRTQEML AHIRAFVSAR SS
Best Arabidopsis Sequence Match ( AT5G16080.1 )
(BLAST)
001: MATISFSHNH QSSDNRRGGS HHHRHGPVVE EIEGLIKVFN DGCVERPPIV PIVSPTIHPS SKATAFDIKL SNDTWTRVYI PDAAAASPSV TLPLLVYFHG
101: GGFCVGSAAW SCYHDFLTSL AVKARCVIVS VNYRLAPEHR LPAAYDDGVN VVSWLVKQQI STGGGYPSWL SKCNLSNVFL AGDSAGANIA YQVAVRIMAS
201: GKYANTLHLK GIILIHPFFG GESRTSSEKQ QHHTKSSALT LSASDAYWRL ALPRGASRDH PWCNPLMSSA GAKLPTTMVF MAEFDILKER NLEMCKVMRS
301: HGKRVEGIVH GGVGHAFHIL DNSSVSRDRI HDMMCRLHNF IHPS
Arabidopsis Description
CXE17Probable carboxylesterase 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFR7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.