Factsheet for PGSC0003DMT400033749

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g009610.1.1	Tomato	cytosol	93.06	93.33
KRH35975	Soybean	cytosol	52.31	57.28
VIT_01s0011g03270.t01	Wine grape	cytosol	58.09	56.78
PGSC0003DMT400033010	Potato	cytosol	53.76	56.19
KRG90787	Soybean	cytosol, mitochondrion	56.94	55.97
GSMUA_Achr6P16980_001	Banana	mitochondrion	45.09	52.7
GSMUA_Achr10P...	Banana	cytosol	44.51	52.2
TraesCS4D01G219100.1	Wheat	mitochondrion	49.13	47.35
Os03t0258200-01	Rice	mitochondrion	50.0	47.14
TraesCS4B01G218900.1	Wheat	mitochondrion	48.55	46.93
HORVU4Hr1G062060.1	Barley	mitochondrion	47.69	46.88
TraesCS4A01G085300.1	Wheat	mitochondrion	48.55	46.67
EER95156	Sorghum	mitochondrion	49.13	45.7
Zm00001d047883_P001	Maize	mitochondrion	48.84	45.68
PGSC0003DMT400040972	Potato	cytosol	32.37	35.9
PGSC0003DMT400007788	Potato	cytosol	32.95	35.4
PGSC0003DMT400022327	Potato	cytosol	24.28	34.01
PGSC0003DMT400057917	Potato	cytosol	31.21	32.93
PGSC0003DMT400057919	Potato	cytosol	29.77	31.5
PGSC0003DMT400054431	Potato	cytosol	30.35	31.34
PGSC0003DMT400033220	Potato	cytosol	28.9	31.25
PGSC0003DMT400017198	Potato	cytosol	29.19	31.17
PGSC0003DMT400017199	Potato	mitochondrion	29.48	30.72
PGSC0003DMT400000390	Potato	cytosol	29.77	30.38
PGSC0003DMT400071863	Potato	cytosol	28.03	29.75
PGSC0003DMT400073501	Potato	cytosol	29.77	29.6
PGSC0003DMT400009831	Potato	cytosol	29.48	29.57
PGSC0003DMT400050566	Potato	cytosol	27.75	29.45
PGSC0003DMT400056562	Potato	cytosol	29.19	29.28
PGSC0003DMT400048357	Potato	cytosol	27.17	28.75

Protein Annotations

EnsemblPlants:PGSC0003DMT400033749	EnsemblPlantsGene:PGSC0003DMG400012964	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	PANTHER:PTHR23024
PANTHER:PTHR23024:SF93	PFAM:PF07859	PGSC:PGSC0003DMG400012964	SUPFAM:SSF53474	UniParc:UPI000295D734	UniProt:M1AZL4
MapMan:35.1	:	:	:	:	:

Description

Lipase [Source:PGSC_GENE;Acc:PGSC0003DMG400012964]

Coordinates

chr5:+:2213939..2215279

Molecular Weight (calculated)

39099.6 Da

IEP (calculated)

9.055

GRAVY (calculated)

-0.024

Length

346 amino acids

Sequence
(BLAST)

001: MTTITYDPNF NNLQKIKEYP QHKVILEEIE GLIKVYKDGH VERPQIVPNV TNKLPLELGV TSSDVVIDRY TNIWARLYVP KILCQGNKLP MLIYFHGGGF
101: CVGSSSWICY HEFLAKLASI ANCVIMSVNY RLAPENRLPS AYDDGVKTIV WIRQKVLIGS NEDYWWLNKV NFSNIYLVGD SAGGNIAYNV AIMLRSKIGD
201: LKPITLKGII LIQPFFGGES RTYSEKYTIQ PPRSALTLAS ADTYWRLALP TGVNRDYPWC NPIGKEGVNL VDIRNIPGIL VCISELDILR DRNLEFCATL
301: NRVSNKKVVE YVMFKGVGHA FQVLSKSQVA QTRTTELIQQ IKGFIS

Best Arabidopsis Sequence Match ( AT1G68620.1 )
(BLAST)

001: MGGTKLTHVT TTNPNNSNIH GPVVDEVEGL IKVYKDGHVE RSQLLPCVDP SLPLELGVTC SDVVIDKLTN VWARLYVPMT TTKSSVSKLP LIVYFHGGGF
101: CVGSASWLCY HEFLARLSAR SRCLVMSVNY RLAPENPLPA AYEDGVNAIL WLNKARNDNL WAKQCDFGRI FLAGDSAGGN IAQQVAARLA SPEDLALKIE
201: GTILIQPFYS GEERTESERR VGNDKTAVLT LASSDAWWRM SLPRGANREH PYCKPVKMII KSSTVTRTLV CVAEMDLLMD SNMEMCDGNE DVIKRVLHKG
301: VGHAFHILGK SQLAHTTTLE MLCQIDAFIH HYDPLN

Arabidopsis Description

CXE6Probable carboxylesterase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX25]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.