Factsheet for PGSC0003DMT400017199

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 3
peroxisome 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

mitochondrion: 24351685

msms PMID: 24351685 doi

F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller

Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400017198	Potato	cytosol	89.76	91.98
Solyc07g040890.1.1	Tomato	cytosol, extracellular	91.27	91.27
PGSC0003DMT400057919	Potato	cytosol	60.84	61.77
PGSC0003DMT400057917	Potato	cytosol	60.54	61.28
PGSC0003DMT400050566	Potato	cytosol	40.36	41.1
PGSC0003DMT400000390	Potato	cytosol	41.87	41.0
PGSC0003DMT400071863	Potato	cytosol	40.06	40.8
PGSC0003DMT400033220	Potato	cytosol	39.16	40.62
PGSC0003DMT400048357	Potato	cytosol	37.35	37.92
PGSC0003DMT400033010	Potato	cytosol	31.93	32.02
PGSC0003DMT400007788	Potato	cytosol	31.02	31.99
PGSC0003DMT400022327	Potato	cytosol	22.29	29.96
PGSC0003DMT400033749	Potato	cytosol	30.72	29.48
PGSC0003DMT400040972	Potato	cytosol	26.81	28.53
PGSC0003DMT400054431	Potato	cytosol	27.11	26.87
PGSC0003DMT400073501	Potato	cytosol	28.01	26.72
PGSC0003DMT400056562	Potato	cytosol	26.51	25.51
PGSC0003DMT400009831	Potato	cytosol	26.2	25.22

Protein Annotations

EnsemblPlants:PGSC0003DMT400017199	EnsemblPlantsGene:PGSC0003DMG400006709	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	MEROPS:S09.A14
PANTHER:PTHR23024	PANTHER:PTHR23024:SF348	PFAM:PF07859	PGSC:PGSC0003DMG400006709	SUPFAM:SSF53474	UniParc:UPI0002964A8E
UniProt:M1A8P1	MapMan:35.1	:	:	:	:

Description

CXE carboxylesterase [Source:PGSC_GENE;Acc:PGSC0003DMG400006709]

Coordinates

chr7:-:36610728..36611980

Molecular Weight (calculated)

36735.0 Da

IEP (calculated)

4.648

GRAVY (calculated)

-0.097

Length

332 amino acids

Sequence
(BLAST)

001: MSDQNSETMP IDPNVDPYGC LGMVRNSDGS ITRLQEPLVP VDTSNDLSHL VFTKDISINS SKNTWARIIL PRELLHSTTN TPKLPLVIYF HGGGFIVATV
101: DTPVFQGLYA SIASEIPAVV VSIEYRQAPE HRLPAAYDDC MEALHWIKTK PDELLSNHAD FSKCFLMGTS AGGNVVYHVG LRAAESWDNL KPLEIKGLIL
201: NQPFFGGIER TQSEVRLVND NMLPPIISDI MWDLGLPEGA DRDHEYSNPM VGIESNPNLF DQVKLLGWKM LVTGCDGDPL IDRQVDLVRV LKELGVQVEG
301: SFTQGAYHGS EVVDPLKAKE FSLLVKELIS HV

Best Arabidopsis Sequence Match ( AT5G62180.1 )
(BLAST)

001: MSEPSPIADP YAYLNIVNNP DGSITRDLSN FPCTAATPDP SPLNPAVSKD LPVNQLKSTW LRLYLPSSAV NEGNVSSQKL PIVVYYHGGG FILCSVDMQL
101: FHDFCSEVAR DLNAIVVSPS YRLAPEHRLP AAYDDGVEAL DWIKTSDDEW IKSHADFSNV FLMGTSAGGN LAYNVGLRSV DSVSDLSPLQ IRGLILHHPF
201: FGGEERSESE IRLMNDQVCP PIVTDVMWDL SLPVGVDRDH EYSNPTVGDG SEKLEKIGRL RWKVMMIGGE DDPMIDLQKD VAKLMKKKGV EVVEHYTGGH
301: VHGAEIRDPS KRKTLFLSIK NFIFSVL

Arabidopsis Description

CXE20Probable carboxylesterase 120 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.