Factsheet for Solyc07g040890.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 4
extracellular 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

extracellular: 22364583

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400017198	Potato	cytosol	89.46	91.67
PGSC0003DMT400017199	Potato	mitochondrion	91.27	91.27
Solyc01g094010.2.1	Tomato	cytosol	41.87	41.0
Solyc01g091410.2.1	Tomato	cytosol, unclear	38.86	40.31
Solyc06g035520.2.1	Tomato	extracellular	37.95	38.65
Solyc02g085800.1.1	Tomato	cytosol	33.73	32.65
Solyc11g071720.1.1	Tomato	cytosol, extracellular	30.72	31.68
Solyc05g009610.1.1	Tomato	cytosol	32.23	31.01
Solyc01g098140.2.1	Tomato	cytosol	59.64	30.56
Solyc10g054780.1.1	Tomato	nucleus	31.33	30.06
Solyc08g060930.2.1	Tomato	cytosol	14.16	29.56
Solyc11g045460.1.1	Tomato	cytosol	21.99	29.55
Solyc02g069800.1.1	Tomato	extracellular	28.01	27.76
Solyc06g008870.2.1	Tomato	cytosol	26.81	25.8
Solyc09g074270.2.1	Tomato	cytosol	26.51	25.51
Solyc01g098390.2.1	Tomato	cytosol	26.81	25.5

Protein Annotations

EnsemblPlants:Solyc07g040890.1.1	EnsemblPlantsGene:Solyc07g040890.1	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058
PANTHER:PTHR23024	PANTHER:PTHR23024:SF348	PFAM:PF07859	SEG:seg	SUPFAM:SSF53474	UniParc:UPI000276B632
UniProt:K4CDW6	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr7:-:50973914..50974912

Molecular Weight (calculated)

36951.3 Da

IEP (calculated)

5.195

GRAVY (calculated)

-0.162

Length

332 amino acids

Sequence
(BLAST)

001: MPNQNNETMP IDPNVDPYGY LGMVHNSDGS ITRLHEPPVP VDTSNDLSHL VFTKDISISS SKNTWARIIL PRELLHSTTS TPKLPLVIYF HGGGFIVATV
101: DSPSFQRFYA SIASEIPAVV VSIEYRQAPE HRLPAAYDDC MEALHWIKTK PDELLSNHAD FSKCFLMGTS AGGNVVYHVG LRAAESWDNL KPLVIKGLIL
201: NQPFFGGNKR TQSEVRLAND KVLPPIISDI MWDLGLPEGA DRDHEYSNPM VGIESKPNLL DQVKLLGWKM LVTGCDGDPL IDRQVDLVKV LKELDVQVEG
301: SFTQGFYHGS EIIDPLKTKE FSLLVKELIS NF

Best Arabidopsis Sequence Match ( AT5G62180.1 )
(BLAST)

001: MSEPSPIADP YAYLNIVNNP DGSITRDLSN FPCTAATPDP SPLNPAVSKD LPVNQLKSTW LRLYLPSSAV NEGNVSSQKL PIVVYYHGGG FILCSVDMQL
101: FHDFCSEVAR DLNAIVVSPS YRLAPEHRLP AAYDDGVEAL DWIKTSDDEW IKSHADFSNV FLMGTSAGGN LAYNVGLRSV DSVSDLSPLQ IRGLILHHPF
201: FGGEERSESE IRLMNDQVCP PIVTDVMWDL SLPVGVDRDH EYSNPTVGDG SEKLEKIGRL RWKVMMIGGE DDPMIDLQKD VAKLMKKKGV EVVEHYTGGH
301: VHGAEIRDPS KRKTLFLSIK NFIFSVL

Arabidopsis Description

CXE20Probable carboxylesterase 120 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.