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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • cytosol 4
  • mitochondrion 2
  • plastid 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
extracellular: 29876421
msms PMID: 29876421 doi
L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400050566 Potato cytosol 96.32 96.32
PGSC0003DMT400071863 Potato cytosol 96.01 96.01
VIT_16s0022g02430.t01 Wine grape cytosol 29.75 44.7
KRH38655 Soybean cytosol 43.25 43.52
KRH09175 Soybean cytosol, plastid 41.1 42.14
VIT_16s0022g02300.t01 Wine grape cytosol 37.42 41.36
Bra029278.1-P Field mustard cytosol 40.8 41.3
KRG91413 Soybean endoplasmic reticulum 42.33 40.95
Bra035904.1-P Field mustard cytosol 41.1 40.85
VIT_16s0100g00010.t01 Wine grape cytosol 40.8 40.8
AT5G62180.1 Thale cress cytosol 40.8 40.67
CDY16790 Canola cytosol 40.8 40.55
KRG91414 Soybean cytosol 40.8 40.43
Solyc01g094010.2.1 Tomato cytosol 41.72 40.12
CDX87235 Canola cytosol, nucleus, plastid 31.29 39.53
Solyc07g040890.1.1 Tomato cytosol, extracellular 38.65 37.95
KRH38654 Soybean cytosol 33.44 37.46
VIT_16s0022g02440.t01 Wine grape cytosol 23.01 37.13
KRH09176 Soybean endoplasmic reticulum 28.22 36.08
Solyc01g091410.2.1 Tomato cytosol, unclear 34.36 35.0
Bra029276.1-P Field mustard cytosol 29.14 34.8
CDY30708 Canola cytosol 29.45 34.78
Solyc11g045460.1.1 Tomato cytosol 23.01 30.36
Solyc11g071720.1.1 Tomato cytosol, extracellular 29.75 30.12
Solyc10g054780.1.1 Tomato nucleus 30.98 29.19
Solyc08g060930.2.1 Tomato cytosol 13.8 28.3
Solyc05g009610.1.1 Tomato cytosol 29.45 27.83
Solyc02g085800.1.1 Tomato cytosol 27.91 26.53
Solyc02g069800.1.1 Tomato extracellular 26.99 26.27
Solyc06g008870.2.1 Tomato cytosol 26.99 25.51
Solyc01g098390.2.1 Tomato cytosol 26.99 25.21
KRH38658 Soybean extracellular 10.74 25.0
Solyc09g074270.2.1 Tomato cytosol 26.07 24.64
Solyc01g098140.2.1 Tomato cytosol 38.04 19.14
Protein Annotations
EnsemblPlants:Solyc06g035520.2.1EnsemblPlantsGene:Solyc06g035520.2Gene3D:3.40.50.1820GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0016787InterPro:AB_hydrolaseInterPro:AB_hydrolase_3InterPro:IPR029058
MEROPS:S09.A14PANTHER:PTHR23024PANTHER:PTHR23024:SF348PFAM:PF07859SUPFAM:SSF53474UniParc:UPI0002765D44
UniProt:K4C4S4MapMan:35.1::::
Description
Probable carboxylesterase 120 [Source:Projected from Arabidopsis thaliana (AT5G62180) UniProtKB/Swiss-Prot;Acc:Q9LVB8]
Coordinates
chr6:+:24439422..24441001
Molecular Weight (calculated)
36705.1 Da
IEP (calculated)
7.496
GRAVY (calculated)
-0.309
Length
326 amino acids
Sequence
(BLAST)
001: MASQRFARPI FDNPFVKIQE LPGNTVKRNS ESLKQANCDP KGTSLVVTRD VDLDTTKNTW LRLYVPRRLT KNPNPKKLPL IMYYHGGGFV YFHANTFIFD
101: VFCQALAERV GAMVISLEYR LAPEHRLPAA YDDAMDGLEW LKNTKDEWVC NYADLTKVFL GGTSSGGNIA YNAGLRAAGM AKELEPIKIK GLLLHHPFFS
201: GKNRTESEEK QKDDQLLPLV AVDKMFDLCL PKGVDHDHEY CNPCANGGSK HLDEMKELGW KVFVSGVCED PLVDAARACV RLMEQKGIKV FKFFRDGYHA
301: MEVFDQSMAA ALYDAAKDFV YAASRT
Best Arabidopsis Sequence Match ( AT5G62180.1 )
(BLAST)
001: MSEPSPIADP YAYLNIVNNP DGSITRDLSN FPCTAATPDP SPLNPAVSKD LPVNQLKSTW LRLYLPSSAV NEGNVSSQKL PIVVYYHGGG FILCSVDMQL
101: FHDFCSEVAR DLNAIVVSPS YRLAPEHRLP AAYDDGVEAL DWIKTSDDEW IKSHADFSNV FLMGTSAGGN LAYNVGLRSV DSVSDLSPLQ IRGLILHHPF
201: FGGEERSESE IRLMNDQVCP PIVTDVMWDL SLPVGVDRDH EYSNPTVGDG SEKLEKIGRL RWKVMMIGGE DDPMIDLQKD VAKLMKKKGV EVVEHYTGGH
301: VHGAEIRDPS KRKTLFLSIK NFIFSVL
Arabidopsis Description
CXE20Probable carboxylesterase 120 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVB8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.