Factsheet for PGSC0003DMT400050566

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071863	Potato	cytosol	98.47	98.47
Solyc06g035520.2.1	Tomato	extracellular	96.32	96.32
PGSC0003DMT400048357	Potato	cytosol	67.79	67.58
VIT_16s0022g02430.t01	Wine grape	cytosol	30.67	46.08
KRH38655	Soybean	cytosol	43.87	44.14
KRH09175	Soybean	cytosol, plastid	41.41	42.45
VIT_16s0022g02300.t01	Wine grape	cytosol	38.34	42.37
AT5G62180.1	Thale cress	cytosol	42.33	42.2
Bra035904.1-P	Field mustard	cytosol	42.33	42.07
VIT_16s0100g00010.t01	Wine grape	cytosol	42.02	42.02
Bra029278.1-P	Field mustard	cytosol	41.41	41.93
CDY16790	Canola	cytosol	42.02	41.77
KRG91413	Soybean	endoplasmic reticulum	42.64	41.25
CDX87235	Canola	cytosol, nucleus, plastid	32.52	41.09
KRG91414	Soybean	cytosol	41.1	40.73
PGSC0003DMT400000390	Potato	cytosol	42.02	40.41
PGSC0003DMT400017199	Potato	mitochondrion	41.1	40.36
PGSC0003DMT400017198	Potato	cytosol	39.26	39.51
VIT_16s0022g02440.t01	Wine grape	cytosol	23.93	38.61
PGSC0003DMT400057919	Potato	cytosol	38.65	38.53
PGSC0003DMT400057917	Potato	cytosol	38.34	38.11
KRH38654	Soybean	cytosol	33.74	37.8
KRH09176	Soybean	endoplasmic reticulum	29.14	37.25
PGSC0003DMT400033220	Potato	cytosol	35.28	35.94
Bra029276.1-P	Field mustard	cytosol	29.14	34.8
CDY30708	Canola	cytosol	29.45	34.78
PGSC0003DMT400022327	Potato	cytosol	23.62	31.17
PGSC0003DMT400007788	Potato	cytosol	29.75	30.12
PGSC0003DMT400033010	Potato	cytosol	28.53	28.1
PGSC0003DMT400033749	Potato	cytosol	29.45	27.75
PGSC0003DMT400040972	Potato	cytosol	26.38	27.56
PGSC0003DMT400054431	Potato	cytosol	26.69	25.97
KRH38658	Soybean	extracellular	11.04	25.71
PGSC0003DMT400073501	Potato	cytosol	26.69	25.0
PGSC0003DMT400056562	Potato	cytosol	26.38	24.93
PGSC0003DMT400009831	Potato	cytosol	25.46	24.06

Protein Annotations

EnsemblPlants:PGSC0003DMT400050566	EnsemblPlantsGene:PGSC0003DMG400019652	EntrezGene:102598060	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058
MEROPS:S09.A14	PANTHER:PTHR23024	PANTHER:PTHR23024:SF348	PFAM:PF07859	PGSC:PGSC0003DMG400019652	RefSeq:XP_006348784.1
SUPFAM:SSF53474	UniParc:UPI0002962285	UniProt:M1BQJ0	MapMan:35.1	:	:

Description

Pepper esterase [Source:PGSC_GENE;Acc:PGSC0003DMG400019652]

Coordinates

chr5:+:1161861..1162920

Molecular Weight (calculated)

36731.1 Da

IEP (calculated)

7.521

GRAVY (calculated)

-0.308

Length

326 amino acids

Sequence
(BLAST)

001: MASQRFARPI FDNPFLKIQE LPGNTVKRNS ESLKQANCDP KGTSLVVTRD VDLDTTKNTW LRLYIPRRLT KNPTPKKLPL IMYYHGGGFV YFHANTFIFD
101: VFCQALAERV GAMVISLEYR LAPEHRLPAA YDDAMDGLEW LKSTKDEWVC NYADLSKVFL GGTSSGGNLA YNAGLRAAAM AKELEPIKIK GLILHHPFFS
201: GKNRTESEEK QKDDQLLPLH AVDKMFDLCL PKGVDHDHEY CNPCANGGSK HLDDMKELGW KVFVSGVCED PLVDAARGCV RLMEQKGIKV FKFFRDGYHA
301: MEVFDQSMAA ALYDAAKDFV YAVSRT

Best Arabidopsis Sequence Match ( AT5G62180.1 )
(BLAST)

001: MSEPSPIADP YAYLNIVNNP DGSITRDLSN FPCTAATPDP SPLNPAVSKD LPVNQLKSTW LRLYLPSSAV NEGNVSSQKL PIVVYYHGGG FILCSVDMQL
101: FHDFCSEVAR DLNAIVVSPS YRLAPEHRLP AAYDDGVEAL DWIKTSDDEW IKSHADFSNV FLMGTSAGGN LAYNVGLRSV DSVSDLSPLQ IRGLILHHPF
201: FGGEERSESE IRLMNDQVCP PIVTDVMWDL SLPVGVDRDH EYSNPTVGDG SEKLEKIGRL RWKVMMIGGE DDPMIDLQKD VAKLMKKKGV EVVEHYTGGH
301: VHGAEIRDPS KRKTLFLSIK NFIFSVL

Arabidopsis Description

CXE20Probable carboxylesterase 120 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.