CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035904.1-P	Field mustard	cytosol	94.57	74.39
CDY16790	Canola	cytosol	92.64	72.87
AT5G62180.1	Thale cress	cytosol	75.58	59.63
VIT_16s0022g02440.t01	Wine grape	cytosol	36.43	46.53
CDY30708	Canola	cytosol	48.84	45.65
VIT_16s0022g02300.t01	Wine grape	cytosol	46.51	40.68
KRH09176	Soybean	endoplasmic reticulum	39.92	40.39
VIT_16s0100g00010.t01	Wine grape	cytosol	50.78	40.18
KRH09175	Soybean	cytosol, plastid	49.22	39.94
KRH38655	Soybean	cytosol	48.45	38.58
KRG91413	Soybean	endoplasmic reticulum	48.06	36.8
KRH38658	Soybean	extracellular	19.77	36.43
VIT_16s0022g02430.t01	Wine grape	cytosol	29.84	35.48
KRG91414	Soybean	cytosol	44.19	34.65
CDX74751	Canola	cytosol	41.47	33.65
CDY18915	Canola	cytosol	41.86	33.13
KRH38654	Soybean	cytosol	36.82	32.65
PGSC0003DMT400050566	Potato	cytosol	41.09	32.52
PGSC0003DMT400071863	Potato	cytosol	41.09	32.52
CDY55764	Canola	cytosol	29.46	32.48
PGSC0003DMT400048357	Potato	cytosol	40.31	31.8
Solyc06g035520.2.1	Tomato	extracellular	39.53	31.29
CDY18914	Canola	cytosol	35.66	28.4
CDX74752	Canola	cytosol	34.88	27.78
CDX81008	Canola	cytosol	35.66	27.54
CDX70090	Canola	cytosol	34.88	27.11
CDX98936	Canola	cytosol	34.5	26.81
CDY16855	Canola	cytosol	33.72	25.97
CDX69476	Canola	cytosol	33.33	25.9
CDY70129	Canola	cytosol	33.33	25.83
CDX80370	Canola	cytosol	33.33	25.67
CDX88032	Canola	cytosol	33.33	25.67
CDX87169	Canola	cytosol	32.95	25.37
CDY67478	Canola	cytosol	31.78	22.91
CDY16687	Canola	cytosol	30.62	22.9
CDX80665	Canola	cytosol	30.23	22.67
CDY63333	Canola	cytosol	31.4	22.63
CDY70667	Canola	cytosol	29.84	21.51
CDX67913	Canola	cytosol	29.84	21.51
CDY27795	Canola	cytosol	28.68	21.39
CDX89165	Canola	cytosol	29.46	21.11
CDX93945	Canola	extracellular, golgi	29.07	21.07
CDY41936	Canola	cytosol	28.29	21.04

Protein Annotations

EnsemblPlants:CDX87235	EnsemblPlantsGene:GSBRNA2T00146171001	Gene3D:3.40.50.1820	GO:A0A078DDD9	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058
PANTHER:PTHR23024	PANTHER:PTHR23024:SF219	PFAM:PF07859	ProteinID:CDX87235	ProteinID:CDX87235.1	SUPFAM:SSF53474
UniParc:UPI0004EF197A	MapMan:35.1	:	:	:	:

Description

BnaC09g05500D

Coordinates

chrLK031849:-:1341212..1342360

Molecular Weight (calculated)

28143.4 Da

IEP (calculated)

5.931

GRAVY (calculated)

-0.135

Length

258 amino acids

Sequence
(BLAST)

001: MSEPTPISDP YAYLNIVKNP DGSITRDLTN FSCTPATPDP SPQTPVVSKD VSINKSKSTW MRLYAPSSTL NDTVPSQKLP LIVYYHGGGF VLCSVDLQVF
101: HGFCSDMARD LNAVVASPSY RLAPEHRLPA AYDDGAEALE WIRNSDEEWI KSRADLSNVF LMGTSAGGNL AYNVGMRSAA ASDLSPLQIR GMILHHPFFG
201: GEERSGSEMR LANDQVCPPI VSDVFWHLSL PVDPSKRKPL FASIGKFISS SAALCNIF

Best Arabidopsis Sequence Match ( AT5G62180.1 )
(BLAST)

001: MSEPSPIADP YAYLNIVNNP DGSITRDLSN FPCTAATPDP SPLNPAVSKD LPVNQLKSTW LRLYLPSSAV NEGNVSSQKL PIVVYYHGGG FILCSVDMQL
101: FHDFCSEVAR DLNAIVVSPS YRLAPEHRLP AAYDDGVEAL DWIKTSDDEW IKSHADFSNV FLMGTSAGGN LAYNVGLRSV DSVSDLSPLQ IRGLILHHPF
201: FGGEERSESE IRLMNDQVCP PIVTDVMWDL SLPVGVDRDH EYSNPTVGDG SEKLEKIGRL RWKVMMIGGE DDPMIDLQKD VAKLMKKKGV EVVEHYTGGH
301: VHGAEIRDPS KRKTLFLSIK NFIFSVL

Arabidopsis Description

CXE20Probable carboxylesterase 120 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.