Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 2
- mitochondrion 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89165 | Canola | cytosol | 91.85 | 90.83 |
| CDX67913 | Canola | cytosol | 89.33 | 88.83 |
| CDY63333 | Canola | cytosol | 88.76 | 88.27 |
| CDY67478 | Canola | cytosol | 88.48 | 87.99 |
| CDY70667 | Canola | cytosol | 88.48 | 87.99 |
| AT3G63010.1 | Thale cress | cytosol | 86.8 | 86.31 |
| VIT_07s0104g00930.t01 | Wine grape | cytosol | 73.6 | 76.16 |
| PGSC0003DMT400009831 | Potato | cytosol | 73.31 | 75.65 |
| Solyc06g008870.2.1 | Tomato | cytosol | 73.03 | 75.36 |
| PGSC0003DMT400056562 | Potato | cytosol | 72.75 | 75.07 |
| Solyc09g074270.2.1 | Tomato | cytosol | 71.63 | 73.91 |
| KRH71503 | Soybean | cytosol | 69.1 | 71.93 |
| KRH31953 | Soybean | cytosol | 67.98 | 70.55 |
| KRH67123 | Soybean | cytosol | 67.42 | 69.36 |
| CDX80665 | Canola | cytosol | 66.85 | 69.19 |
| CDY16687 | Canola | cytosol | 66.85 | 68.99 |
| CDY41936 | Canola | cytosol | 64.04 | 65.71 |
| CDY27795 | Canola | cytosol | 63.48 | 65.32 |
| GSMUA_Achr3P24930_001 | Banana | cytosol | 55.62 | 64.71 |
| GSMUA_Achr5P27430_001 | Banana | cytosol | 55.62 | 64.29 |
| GSMUA_Achr6P16090_001 | Banana | cytosol | 55.34 | 64.17 |
| GSMUA_Achr8P05910_001 | Banana | cytosol | 54.49 | 63.61 |
| GSMUA_Achr10P... | Banana | cytosol | 54.49 | 62.58 |
| GSMUA_Achr5P27450_001 | Banana | mitochondrion | 55.34 | 58.28 |
| Os05t0407500-01 | Rice | cytosol, nucleus | 56.46 | 56.78 |
| TraesCS1A01G255100.1 | Wheat | cytosol | 55.62 | 55.77 |
| TraesCS1B01G265900.1 | Wheat | cytosol | 55.62 | 55.77 |
| Zm00001d010308_P001 | Maize | cytosol, plastid | 54.78 | 55.71 |
| HORVU1Hr1G060810.1 | Barley | cytosol | 55.06 | 55.37 |
| TraesCS1D01G254500.1 | Wheat | cytosol | 55.06 | 55.37 |
| KXG21982 | Sorghum | cytosol | 55.06 | 55.21 |
| Zm00001d038165_P003 | Maize | cytosol | 54.21 | 54.99 |
| CDY16855 | Canola | cytosol | 35.67 | 37.91 |
| CDX87169 | Canola | cytosol | 34.83 | 37.01 |
| CDX88032 | Canola | cytosol | 33.99 | 36.12 |
| CDX80370 | Canola | cytosol | 33.71 | 35.82 |
| CDY55764 | Canola | cytosol | 20.79 | 31.62 |
| CDX81008 | Canola | cytosol | 29.21 | 31.14 |
| CDX70090 | Canola | cytosol | 28.65 | 30.72 |
| CDX98936 | Canola | cytosol | 28.65 | 30.72 |
| CDX69476 | Canola | cytosol | 27.53 | 29.52 |
| CDY70129 | Canola | cytosol | 27.53 | 29.43 |
| CDX87235 | Canola | cytosol, nucleus, plastid | 21.07 | 29.07 |
| CDX74751 | Canola | cytosol | 25.84 | 28.93 |
| CDY18915 | Canola | cytosol | 26.4 | 28.83 |
| CDY16790 | Canola | cytosol | 26.4 | 28.66 |
| CDY18914 | Canola | cytosol | 24.16 | 26.54 |
| CDX74752 | Canola | cytosol | 24.16 | 26.54 |
| CDY30708 | Canola | cytosol | 18.82 | 24.28 |
Protein Annotations
| MapMan:11.6.2.1 | Gene3D:3.40.50.1820 | GO:A0A078DX92 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_3 | EnsemblPlants:CDX93945 |
| ProteinID:CDX93945 | ProteinID:CDX93945.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00156774001 | InterPro:IPR029058 | InterPro:Lipase_GDXG_HIS_AS | InterPro:Lipase_GDXG_put_SER_AS | PFAM:PF07859 |
| ScanProsite:PS01173 | ScanProsite:PS01174 | PANTHER:PTHR23024 | PANTHER:PTHR23024:SF353 | SUPFAM:SSF53474 | UniParc:UPI0004EECA67 |
Description
BnaC04g21040D
Coordinates
chrLK031878:-:817084..818243
Molecular Weight (calculated)
40249.8 Da
IEP (calculated)
6.792
GRAVY (calculated)
-0.200
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MIIIMDSLRI VPLNTWVLIS NFKLAYTLLR RPDGSFNRHL AEFLDRKVPS NSFPLDGVFS FDHLDSTSNL LTRIYLPAPL DPSRYGAVDL TEPLSTPEIV
101: PVFIFFHGGS FTHSSANSAI YDTFCRRLVT ICGVVVVSVD YRRSPEHRYP CAYDDGWNAL KWVKSRVWLQ SGKDSNVYVY LAGDSSGGNI AHNVAVRATN
201: EGVKVLGNIL LHPMFGGVER TQSEKRLDGK YFVTVQDRDW YWRAYLPEGE DRDHPACNPF GPRGQSLEGV TFPKSLVVVA GLDLVQDWQL AYVDGLRKTG
301: HDVNLLYLKQ ATIGFYFLPN NDHFHCLMDE LKKFVHSIEE DSQKQAKSYS SESIAT
101: PVFIFFHGGS FTHSSANSAI YDTFCRRLVT ICGVVVVSVD YRRSPEHRYP CAYDDGWNAL KWVKSRVWLQ SGKDSNVYVY LAGDSSGGNI AHNVAVRATN
201: EGVKVLGNIL LHPMFGGVER TQSEKRLDGK YFVTVQDRDW YWRAYLPEGE DRDHPACNPF GPRGQSLEGV TFPKSLVVVA GLDLVQDWQL AYVDGLRKTG
301: HDVNLLYLKQ ATIGFYFLPN NDHFHCLMDE LKKFVHSIEE DSQKQAKSYS SESIAT
001: MAASDEVNLI ESRTVVPLNT WVLISNFKVA YNILRRPDGT FNRHLAEYLD RKVTANANPV DGVFSFDVLI DRRINLLSRV YRPAYADQEQ PPSILDLEKP
101: VDGDIVPVIL FFHGGSFAHS SANSAIYDTL CRRLVGLCKC VVVSVNYRRA PENPYPCAYD DGWIALNWVN SRSWLKSKKD SKVHIFLAGD SSGGNIAHNV
201: ALRAGESGID VLGNILLNPM FGGNERTESE KSLDGKYFVT VRDRDWYWKA FLPEGEDREH PACNPFSPRG KSLEGVSFPK SLVVVAGLDL IRDWQLAYAE
301: GLKKAGQEVK LMHLEKATVG FYLLPNNNHF HNVMDEISAF VNAEC
101: VDGDIVPVIL FFHGGSFAHS SANSAIYDTL CRRLVGLCKC VVVSVNYRRA PENPYPCAYD DGWIALNWVN SRSWLKSKKD SKVHIFLAGD SSGGNIAHNV
201: ALRAGESGID VLGNILLNPM FGGNERTESE KSLDGKYFVT VRDRDWYWKA FLPEGEDREH PACNPFSPRG KSLEGVSFPK SLVVVAGLDL IRDWQLAYAE
301: GLKKAGQEVK LMHLEKATVG FYLLPNNNHF HNVMDEISAF VNAEC
Arabidopsis Description
GID1AGID1A [Source:UniProtKB/TrEMBL;Acc:A0A178VM30]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.