Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU4Hr1G006930.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G265900.1 | Wheat | cytosol | 96.33 | 96.06 |
| TraesCS1D01G254500.1 | Wheat | cytosol | 95.48 | 95.48 |
| TraesCS1A01G255100.1 | Wheat | cytosol | 94.63 | 94.37 |
| KXG21982 | Sorghum | cytosol | 83.05 | 82.82 |
| Os05t0407500-01 | Rice | cytosol, nucleus | 82.77 | 82.77 |
| Zm00001d038165_P003 | Maize | cytosol | 81.36 | 82.05 |
| Zm00001d010308_P001 | Maize | cytosol, plastid | 77.97 | 78.86 |
| GSMUA_Achr3P24930_001 | Banana | cytosol | 59.89 | 69.28 |
| GSMUA_Achr6P16090_001 | Banana | cytosol | 58.47 | 67.43 |
| GSMUA_Achr10P... | Banana | cytosol | 59.04 | 67.42 |
| GSMUA_Achr5P27430_001 | Banana | cytosol | 58.47 | 67.21 |
| GSMUA_Achr8P05910_001 | Banana | cytosol | 57.63 | 66.89 |
| AT3G05120.1 | Thale cress | cytosol | 61.3 | 62.9 |
| AT5G27320.1 | Thale cress | cytosol | 61.02 | 62.79 |
| CDX80665 | Canola | cytosol | 60.73 | 62.5 |
| VIT_07s0104g00930.t01 | Wine grape | cytosol | 60.73 | 62.5 |
| CDY27795 | Canola | cytosol | 61.02 | 62.43 |
| Bra009970.1-P | Field mustard | cytosol | 60.73 | 62.32 |
| CDY16687 | Canola | cytosol | 60.45 | 62.03 |
| Solyc06g008870.2.1 | Tomato | cytosol | 60.17 | 61.74 |
| GSMUA_Achr5P27450_001 | Banana | mitochondrion | 58.76 | 61.54 |
| PGSC0003DMT400056562 | Potato | cytosol | 59.89 | 61.45 |
| CDY41936 | Canola | cytosol | 60.17 | 61.38 |
| KRH33997 | Soybean | cytosol | 59.6 | 61.34 |
| PGSC0003DMT400073501 | Potato | cytosol | 60.17 | 61.21 |
| KRG92803 | Soybean | cytosol | 59.32 | 61.05 |
| KRH31953 | Soybean | cytosol | 59.04 | 60.93 |
| KRH71503 | Soybean | cytosol | 58.76 | 60.82 |
| Solyc01g098390.2.1 | Tomato | cytosol | 59.6 | 60.46 |
| PGSC0003DMT400009831 | Potato | cytosol | 58.47 | 60.0 |
| KRH67123 | Soybean | cytosol | 58.19 | 59.54 |
| Solyc09g074270.2.1 | Tomato | cytosol | 57.06 | 58.55 |
| CDY67478 | Canola | cytosol | 59.04 | 58.38 |
| CDY63333 | Canola | cytosol | 58.76 | 58.1 |
| VIT_14s0030g00440.t01 | Wine grape | cytosol | 61.58 | 57.82 |
| AT3G63010.1 | Thale cress | cytosol | 58.47 | 57.82 |
| Bra007722.1-P | Field mustard | cytosol | 58.47 | 57.82 |
| Bra040420.1-P | Field mustard | cytosol | 57.91 | 56.94 |
| CDX89165 | Canola | cytosol | 57.91 | 56.94 |
| Bra003520.1-P | Field mustard | cytosol | 56.78 | 56.15 |
| CDX67913 | Canola | cytosol | 56.78 | 56.15 |
| CDY70667 | Canola | cytosol | 56.5 | 55.87 |
| CDX93945 | Canola | extracellular, golgi | 55.37 | 55.06 |
| Bra039460.1-P | Field mustard | cytosol | 61.02 | 54.55 |
| HORVU1Hr1G037570.2 | Barley | cytosol, mitochondrion, peroxisome | 35.88 | 35.88 |
| HORVU2Hr1G025390.1 | Barley | mitochondrion | 34.18 | 34.57 |
| HORVU4Hr1G015550.1 | Barley | mitochondrion | 32.77 | 34.02 |
| HORVU2Hr1G079270.1 | Barley | cytosol | 29.1 | 31.5 |
| HORVU4Hr1G015560.1 | Barley | plastid | 34.18 | 30.79 |
| HORVU2Hr1G025230.1 | Barley | cytosol, plastid | 29.94 | 30.64 |
| HORVU5Hr1G103770.1 | Barley | cytosol | 28.53 | 29.97 |
| HORVU2Hr1G025360.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 19.21 | 29.96 |
| HORVU6Hr1G090630.1 | Barley | cytosol, plastid | 29.1 | 29.34 |
| HORVU4Hr1G062060.1 | Barley | mitochondrion | 29.1 | 29.26 |
| HORVU6Hr1G077260.1 | Barley | cytosol | 28.53 | 28.61 |
| HORVU7Hr1G097660.1 | Barley | cytosol | 26.55 | 28.23 |
| HORVU3Hr1G024660.1 | Barley | cytosol | 27.97 | 27.73 |
| HORVU2Hr1G032290.4 | Barley | plastid | 24.01 | 27.69 |
| HORVU3Hr1G024890.2 | Barley | cytosol | 25.99 | 27.46 |
| HORVU7Hr1G057260.1 | Barley | cytosol | 26.55 | 26.63 |
| HORVU4Hr1G062730.1 | Barley | peroxisome | 24.01 | 25.91 |
| HORVU1Hr1G063380.1 | Barley | plastid | 26.27 | 25.91 |
| HORVU1Hr1G063450.1 | Barley | plastid | 25.71 | 25.35 |
| HORVU0Hr1G022260.2 | Barley | mitochondrion | 25.42 | 23.87 |
| HORVU2Hr1G025290.1 | Barley | cytosol, plastid | 22.03 | 22.54 |
| HORVU1Hr1G037610.1 | Barley | plastid | 22.88 | 21.89 |
| HORVU2Hr1G025380.7 | Barley | cytosol | 19.21 | 18.48 |
Protein Annotations
| MapMan:11.6.2.1 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_3 | ProteinID:ACU68592.1 | EMBL:AK354684 |
| EMBL:AK356665 | EMBL:AK364967 | UniProt:C8CLF3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0010331 | GO:GO:0016787 | EnsemblPlantsGene:HORVU1Hr1G060810 |
| EnsemblPlants:HORVU1Hr1G060810.1 | InterPro:IPR029058 | InterPro:Lipase_GDXG_put_SER_AS | PFAM:PF07859 | ScanProsite:PS01174 | PANTHER:PTHR23024 |
| PANTHER:PTHR23024:SF227 | SUPFAM:SSF53474 | UniParc:UPI00015BFD21 | SEG:seg | : | : |
Description
GID1-like gibberellin receptor [Source:UniProtKB/TrEMBL;Acc:C8CLF3]
Coordinates
chrchr1H:-:441473716..441477633
Molecular Weight (calculated)
39468.8 Da
IEP (calculated)
6.834
GRAVY (calculated)
-0.323
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSDEVNRN ECKTVVPLHT WVLISNFKVS YHMLRRPDGT FERDLAEYMD RRVPANPKPV EGVSSFDHVI DHSVGLEARI YRAVAGNAAA AEGAAALTLP
101: ILEFLSGAPS PDPLPVIIFF HGGSFAHSAS STTIYDNLCR QLVKLSKGVV VSVNYRRAPE HRYPCAYDDG WTALKWAQAQ PFLRSGEDAQ PRVFLAGDSS
201: GGNIAHHVAV RAAEEGIKIH GNILLNAMFG GKERTESERR LDGKYFVTMQ DRDWYWKAYL PEDADRDHPA CNPFGPNGRR LKGLPFAKSL IIVSGLDLTC
301: DRQLGYAEGL REDGHHVKVV HREKATIGFY LLSNTDHYHE VMEEIADFVQ LNLR
101: ILEFLSGAPS PDPLPVIIFF HGGSFAHSAS STTIYDNLCR QLVKLSKGVV VSVNYRRAPE HRYPCAYDDG WTALKWAQAQ PFLRSGEDAQ PRVFLAGDSS
201: GGNIAHHVAV RAAEEGIKIH GNILLNAMFG GKERTESERR LDGKYFVTMQ DRDWYWKAYL PEDADRDHPA CNPFGPNGRR LKGLPFAKSL IIVSGLDLTC
301: DRQLGYAEGL REDGHHVKVV HREKATIGFY LLSNTDHYHE VMEEIADFVQ LNLR
001: MAGSEEVNLI ESKTVVPLNT WVLISNFKLA YNLLRRPDGT FNRHLAEFLD RKVPANANPV NGVFSFDVII DRQTNLLSRV YRPADAGTSP SITDLQNPVD
101: GEIVPVIVFF HGGSFAHSSA NSAIYDTLCR RLVGLCGAVV VSVNYRRAPE NRYPCAYDDG WAVLKWVNSS SWLRSKKDSK VRIFLAGDSS GGNIVHNVAV
201: RAVESRIDVL GNILLNPMFG GTERTESEKR LDGKYFVTVR DRDWYWRAFL PEGEDREHPA CSPFGPRSKS LEGLSFPKSL VVVAGLDLIQ DWQLKYAEGL
301: KKAGQEVKLL YLEQATIGFY LLPNNNHFHT VMDEIAAFVN AECQ
101: GEIVPVIVFF HGGSFAHSSA NSAIYDTLCR RLVGLCGAVV VSVNYRRAPE NRYPCAYDDG WAVLKWVNSS SWLRSKKDSK VRIFLAGDSS GGNIVHNVAV
201: RAVESRIDVL GNILLNPMFG GTERTESEKR LDGKYFVTVR DRDWYWRAFL PEGEDREHPA CSPFGPRSKS LEGLSFPKSL VVVAGLDLIQ DWQLKYAEGL
301: KKAGQEVKLL YLEQATIGFY LLPNNNHFHT VMDEIAAFVN AECQ
Arabidopsis Description
GID1CGID1C [Source:UniProtKB/TrEMBL;Acc:A0A178UKX0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.