Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH33997 | Soybean | cytosol | 96.22 | 96.22 |
| AT5G27320.1 | Thale cress | cytosol | 78.49 | 78.49 |
| CDX80665 | Canola | cytosol | 77.62 | 77.62 |
| Bra009970.1-P | Field mustard | cytosol | 77.62 | 77.39 |
| CDY16687 | Canola | cytosol | 77.62 | 77.39 |
| AT3G05120.1 | Thale cress | cytosol | 76.74 | 76.52 |
| PGSC0003DMT400073501 | Potato | cytosol | 76.74 | 75.86 |
| Solyc01g098390.2.1 | Tomato | cytosol | 76.74 | 75.64 |
| VIT_14s0030g00440.t01 | Wine grape | cytosol | 80.81 | 73.74 |
| CDY41936 | Canola | cytosol | 73.84 | 73.2 |
| CDY27795 | Canola | cytosol | 73.26 | 72.83 |
| KRH71503 | Soybean | cytosol | 72.38 | 72.81 |
| KRH67123 | Soybean | cytosol | 72.09 | 71.68 |
| GSMUA_Achr3P24930_001 | Banana | cytosol | 63.66 | 71.57 |
| KRH31953 | Soybean | cytosol | 70.93 | 71.14 |
| GSMUA_Achr8P05910_001 | Banana | cytosol | 61.34 | 69.18 |
| GSMUA_Achr5P27430_001 | Banana | cytosol | 61.34 | 68.51 |
| GSMUA_Achr10P... | Banana | cytosol | 61.34 | 68.06 |
| GSMUA_Achr6P16090_001 | Banana | cytosol | 60.17 | 67.43 |
| Bra039460.1-P | Field mustard | cytosol | 73.55 | 63.89 |
| GSMUA_Achr5P27450_001 | Banana | mitochondrion | 61.34 | 62.43 |
| Os05t0407500-01 | Rice | cytosol, nucleus | 62.5 | 60.73 |
| TraesCS1B01G265900.1 | Wheat | cytosol | 61.34 | 59.44 |
| HORVU1Hr1G060810.1 | Barley | cytosol | 61.05 | 59.32 |
| TraesCS1A01G255100.1 | Wheat | cytosol | 61.05 | 59.15 |
| KXG21982 | Sorghum | cytosol | 61.05 | 59.15 |
| Zm00001d010308_P001 | Maize | cytosol, plastid | 60.17 | 59.14 |
| TraesCS1D01G254500.1 | Wheat | cytosol | 60.47 | 58.76 |
| Zm00001d038165_P003 | Maize | cytosol | 59.88 | 58.69 |
| KRH09280 | Soybean | plastid | 40.7 | 41.42 |
| KRH38783 | Soybean | plastid | 38.95 | 39.76 |
| KRH09281 | Soybean | plastid | 37.5 | 38.17 |
| KRH38784 | Soybean | plastid | 39.24 | 37.4 |
| KRH09282 | Soybean | extracellular | 35.47 | 36.86 |
| KRH56173 | Soybean | cytosol | 30.81 | 32.22 |
| KRH25344 | Soybean | peroxisome | 27.33 | 30.62 |
| KRH68056 | Soybean | cytosol | 28.2 | 29.94 |
| KRH32935 | Soybean | cytosol | 28.78 | 29.82 |
| KRG96320 | Soybean | cytosol | 27.91 | 29.63 |
| KRG91414 | Soybean | cytosol | 28.2 | 29.48 |
| KRH20616 | Soybean | cytosol | 23.26 | 29.3 |
| KRH71756 | Soybean | cytosol | 28.2 | 29.22 |
| KRG91413 | Soybean | endoplasmic reticulum | 28.49 | 29.08 |
| KRH38655 | Soybean | cytosol | 27.33 | 29.01 |
| KRH05152 | Soybean | cytosol | 25.58 | 28.48 |
| KRH56206 | Soybean | cytosol | 27.91 | 28.4 |
| KRH09175 | Soybean | cytosol, plastid | 26.16 | 28.3 |
| KRH01780 | Soybean | cytosol | 27.62 | 27.94 |
| KRH35975 | Soybean | cytosol | 25.58 | 27.85 |
| KRH48319 | Soybean | nucleus | 27.03 | 27.84 |
| KRH48318 | Soybean | cytosol | 25.58 | 27.59 |
| KRG90787 | Soybean | cytosol, mitochondrion | 28.2 | 27.56 |
| KRH46912 | Soybean | cytosol | 28.49 | 27.07 |
| KRH65207 | Soybean | cytosol | 25.0 | 26.96 |
| KRH62746 | Soybean | cytosol | 23.84 | 26.2 |
| KRH09176 | Soybean | endoplasmic reticulum | 18.6 | 25.1 |
| KRH38654 | Soybean | cytosol | 20.64 | 24.4 |
| KRH38658 | Soybean | extracellular | 6.98 | 17.14 |
Protein Annotations
| EntrezGene:100775474 | MapMan:11.6.2.1 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_3 | EMBL:ACUP02012768 |
| EnsemblPlantsGene:GLYMA_20G230600 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005975 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009056 |
| GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009939 |
| GO:GO:0009987 | GO:GO:0010325 | GO:GO:0010331 | GO:GO:0016787 | GO:GO:0048444 | InterPro:IPR029058 |
| UniProt:K7N568 | ProteinID:KRG92801.1 | ProteinID:KRG92802.1 | EnsemblPlants:KRG92803 | ProteinID:KRG92803 | ProteinID:KRG92803.1 |
| InterPro:Lipase_GDXG_HIS_AS | InterPro:Lipase_GDXG_put_SER_AS | PFAM:PF07859 | ScanProsite:PS01173 | ScanProsite:PS01174 | PANTHER:PTHR23024 |
| PANTHER:PTHR23024:SF227 | MEROPS:S09.A10 | SUPFAM:SSF53474 | UniParc:UPI000233DD6F | : | : |
Description
hypothetical protein
Coordinates
chr20:+:46451800..46454405
Molecular Weight (calculated)
38671.1 Da
IEP (calculated)
6.319
GRAVY (calculated)
-0.215
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSNELNPN DSKMVVPLNM WVLISNFKLA YNLLRRPDGT FNRDLAEFLD RKVPANANPV DGVFSFDVIV DRETNLLTRI YRLAEGEERS VNILDLEKPV
101: NSEVVPVIIF FHGGSFAHSS ANSAIYDTLC RRLVGICKAV VVSVNYRRAP ENRYPCAYDD GWTALKWVSS ASWLQSRKDK KVHIYMAGDS SGGNIVHHVA
201: LKAMESGIEV FGNILLNPLF GGQERTESEK RLDGRYFVGV KDRDWYWRAF LPEGEDRDHH ACNPFGPKGK SLEGITFPKS LVVVAGLDLV QDWQLGYAKG
301: LEKAGQEVKL LFLEQATVGF YLLPNNEHFS PVMDEIKYFV GSDC
101: NSEVVPVIIF FHGGSFAHSS ANSAIYDTLC RRLVGICKAV VVSVNYRRAP ENRYPCAYDD GWTALKWVSS ASWLQSRKDK KVHIYMAGDS SGGNIVHHVA
201: LKAMESGIEV FGNILLNPLF GGQERTESEK RLDGRYFVGV KDRDWYWRAF LPEGEDRDHH ACNPFGPKGK SLEGITFPKS LVVVAGLDLV QDWQLGYAKG
301: LEKAGQEVKL LFLEQATVGF YLLPNNEHFS PVMDEIKYFV GSDC
001: MAGSEEVNLI ESKTVVPLNT WVLISNFKLA YNLLRRPDGT FNRHLAEFLD RKVPANANPV NGVFSFDVII DRQTNLLSRV YRPADAGTSP SITDLQNPVD
101: GEIVPVIVFF HGGSFAHSSA NSAIYDTLCR RLVGLCGAVV VSVNYRRAPE NRYPCAYDDG WAVLKWVNSS SWLRSKKDSK VRIFLAGDSS GGNIVHNVAV
201: RAVESRIDVL GNILLNPMFG GTERTESEKR LDGKYFVTVR DRDWYWRAFL PEGEDREHPA CSPFGPRSKS LEGLSFPKSL VVVAGLDLIQ DWQLKYAEGL
301: KKAGQEVKLL YLEQATIGFY LLPNNNHFHT VMDEIAAFVN AECQ
101: GEIVPVIVFF HGGSFAHSSA NSAIYDTLCR RLVGLCGAVV VSVNYRRAPE NRYPCAYDDG WAVLKWVNSS SWLRSKKDSK VRIFLAGDSS GGNIVHNVAV
201: RAVESRIDVL GNILLNPMFG GTERTESEKR LDGKYFVTVR DRDWYWRAFL PEGEDREHPA CSPFGPRSKS LEGLSFPKSL VVVAGLDLIQ DWQLKYAEGL
301: KKAGQEVKLL YLEQATIGFY LLPNNNHFHT VMDEIAAFVN AECQ
Arabidopsis Description
GID1CGID1C [Source:UniProtKB/TrEMBL;Acc:A0A178UKX0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.