CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g094010.2.1	Tomato	cytosol	57.19	56.34
Bra004924.1-P	Field mustard	cytosol	53.59	55.25
PGSC0003DMT400000390	Potato	cytosol	55.99	55.16
CDY18915	Canola	cytosol	53.29	54.6
AT2G45600.1	Thale cress	cytosol	53.59	54.41
CDX74751	Canola	cytosol	51.2	53.77
VIT_15s0048g01390.t01	Wine grape	plastid	52.99	52.68
GSMUA_Achr7P16460_001	Banana	cytosol	50.3	51.85
VIT_15s0048g01350.t01	Wine grape	cytosol	49.1	48.96
GSMUA_Achr6P32510_001	Banana	cytosol	41.62	48.1
KRH38655	Soybean	cytosol	45.81	47.22
KRH09175	Soybean	cytosol, plastid	44.61	46.86
GSMUA_Achr4P04980_001	Banana	cytosol	43.71	45.2
Os08t0547800-01	Rice	cytosol, plasma membrane	43.71	44.24
KRG91414	Soybean	cytosol	43.11	43.77
Zm00001d032036_P001	Maize	extracellular	42.81	43.47
KRH65207	Soybean	cytosol	41.32	43.26
Zm00001d028440_P001	Maize	peroxisome	42.52	42.9
KRH48318	Soybean	cytosol	40.72	42.63
EER92547	Sorghum	cytosol	42.22	42.6
TraesCS4B01G222200.1	Wheat	peroxisome	41.92	42.55
KRG91413	Soybean	endoplasmic reticulum	42.81	42.43
HORVU4Hr1G062730.1	Barley	peroxisome	41.32	42.07
TraesCS4D01G222700.1	Wheat	peroxisome	41.62	41.99
TraesCS4A01G081600.1	Wheat	peroxisome	41.62	41.74
TraesCS7A01G271100.1	Wheat	cytosol, plastid	43.41	41.08
TraesCS7B01G169300.1	Wheat	cytosol, peroxisome, plastid	43.11	40.79
EES14122	Sorghum	cytosol	41.62	40.76
Os03t0252100-01	Rice	cytosol, peroxisome	42.52	40.69
TraesCS7D01G271500.1	Wheat	cytosol	42.52	40.23
KRH38654	Soybean	cytosol	34.13	39.18
HORVU7Hr1G057260.1	Barley	cytosol	41.32	39.09
KRH09176	Soybean	endoplasmic reticulum	27.84	36.47
KRH25344	Soybean	peroxisome	29.64	32.25
KRH05152	Soybean	cytosol	29.64	32.04
KRH56173	Soybean	cytosol	31.44	31.91
KRG96320	Soybean	cytosol	30.84	31.79
KRH68056	Soybean	cytosol	30.54	31.48
KRH71756	Soybean	cytosol	30.24	30.42
KRH32935	Soybean	cytosol	29.94	30.12
KRH38658	Soybean	extracellular	12.28	29.29
KRH20616	Soybean	cytosol	23.35	28.57
KRH01780	Soybean	cytosol	29.04	28.53
KRH35975	Soybean	cytosol	26.95	28.48
KRG90787	Soybean	cytosol, mitochondrion	29.94	28.41
KRH56206	Soybean	cytosol	28.44	28.11
KRH09282	Soybean	extracellular	27.84	28.1
KRH46912	Soybean	cytosol	29.94	27.62
KRH33997	Soybean	cytosol	28.44	27.62
KRH31953	Soybean	cytosol	27.84	27.11
KRG92803	Soybean	cytosol	27.84	27.03
KRH09281	Soybean	plastid	27.25	26.92
KRH71503	Soybean	cytosol	27.25	26.61
KRH38783	Soybean	plastid	26.65	26.41
KRH67123	Soybean	cytosol	27.25	26.3
KRH09280	Soybean	plastid	25.75	25.44
KRH62746	Soybean	cytosol	23.65	25.24
KRH38784	Soybean	plastid	26.35	24.38

Protein Annotations

EntrezGene:100814398	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	EMBL:ACUP02004222
EnsemblPlantsGene:GLYMA_07G082500	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016787	UniProt:I1KIL5	InterPro:IPR029058	EnsemblPlants:KRH48319	ProteinID:KRH48319	ProteinID:KRH48319.1
PFAM:PF07859	PANTHER:PTHR23024	PANTHER:PTHR23024:SF113	MEROPS:S09.A11	SUPFAM:SSF53474	UniParc:UPI0001BA88EE
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:7568946..7570260

Molecular Weight (calculated)

36375.4 Da

IEP (calculated)

5.979

GRAVY (calculated)

-0.051

Length

334 amino acids

Sequence
(BLAST)

001: MSEPPPPSSS AMDPYDFLKI KLNPDGNSLT RNYVVPTVPP SATTPSSEPA LSKDIPLNPT TNTSLRLFLP NPPPPSAAKL PLIIYFHGGG FILYHPSSLI
101: FHRSCAALAA SLPAIIASVD YRLCPEHRLP AAYHDALEAL HWAQAQAQAQ AQSDPWLRDY VDFSKTFLMG SSAGGNIAFF TALNSLSLSL SPLKILGVIM
201: NIPYFSGVHR SDSELRLVDD RILPLPANDL MWSLSLPEGA DRDHVYCNPT AVDNEHGDAI GRLPPCFING YGGDPLVDKQ KELVKILEAR GVRVDARFVE
301: DGFHAVELFD QAKAFALGQN IKNFILSITS QSSM

Best Arabidopsis Sequence Match ( AT2G45600.1 )
(BLAST)

001: MEAPPPSSDP YKFLNITLNS DGSLTRHRDF PKLPPTEQSK DIPLNQTNNT FIRIFKPRNI PPESKLPILV YFHGGGFILY SAASAPFHES CTKMADRLQT
101: IILSVEYRLA PEHRLPAAYE DAVEAILWLR DQARGPINGG DCDTWLKDGV DFSKCYVMGS SSGGNIVYNV ALRVVDTDLS PVKIQGLIMN QAFFGGVEPS
201: DSESRLKDDK ICPLPATHLL WSLCLPDGVD RDHVYSNPIK SSGPQEKDKM GRFPSTLING YGGDPLVDRQ RHVAEMLKGR GVHVETRFDK DGFHACELFD
301: GNKAKALYET VEAFMKSCSS TGPSSNSNM

Arabidopsis Description

CXE8Probable carboxylesterase 8 [Source:UniProtKB/Swiss-Prot;Acc:O64640]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.