Factsheet for GSMUA_Achr6P32510_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P04980_001	Banana	cytosol	76.47	68.42
Zm00001d032036_P001	Maize	extracellular	60.21	52.89
Os08t0547800-01	Rice	cytosol, plasma membrane	57.44	50.3
EES14122	Sorghum	cytosol	58.48	49.56
TraesCS7D01G271500.1	Wheat	cytosol	59.17	48.44
TraesCS7B01G169300.1	Wheat	cytosol, peroxisome, plastid	59.17	48.44
TraesCS7A01G271100.1	Wheat	cytosol, plastid	58.48	47.88
HORVU7Hr1G057260.1	Barley	cytosol	58.13	47.59
VIT_15s0048g01390.t01	Wine grape	plastid	53.63	46.13
VIT_15s0048g01350.t01	Wine grape	cytosol	50.17	43.28
Solyc01g094010.2.1	Tomato	cytosol	49.83	42.48
GSMUA_Achr7P16460_001	Banana	cytosol	47.06	41.98
PGSC0003DMT400000390	Potato	cytosol	49.13	41.89
KRH48319	Soybean	nucleus	48.1	41.62
AT2G45600.1	Thale cress	cytosol	45.67	40.12
CDX74751	Canola	cytosol	43.6	39.62
Bra004924.1-P	Field mustard	cytosol	43.94	39.2
CDY18915	Canola	cytosol	43.6	38.65
GSMUA_Achr6P16980_001	Banana	mitochondrion	31.14	30.41
GSMUA_Achr10P...	Banana	cytosol	29.76	29.15
GSMUA_Achr9P08260_001	Banana	plastid	21.45	27.43
GSMUA_Achr11P...	Banana	cytosol	27.68	26.14
GSMUA_Achr9P08270_001	Banana	cytosol, plastid	29.07	25.61
GSMUA_Achr2P05600_001	Banana	plastid	27.34	25.16
GSMUA_Achr2P01900_001	Banana	cytosol	26.99	25.08
GSMUA_Achr8P05900_001	Banana	cytosol	23.53	24.91
GSMUA_Achr10P...	Banana	cytosol	26.3	24.52
GSMUA_Achr6P29040_001	Banana	plastid	25.61	24.1
GSMUA_Achr6P16090_001	Banana	cytosol	25.61	24.1
GSMUA_Achr3P24930_001	Banana	cytosol	25.26	23.86
GSMUA_Achr5P27430_001	Banana	cytosol	24.22	22.73
GSMUA_Achr6P29020_001	Banana	mitochondrion	26.3	22.35
GSMUA_Achr8P05910_001	Banana	cytosol	23.53	22.3
GSMUA_Achr5P27450_001	Banana	mitochondrion	24.22	20.71

Protein Annotations

EnsemblPlants:GSMUA_Achr6P32510_001	EnsemblPlants:GSMUA_Achr6T32510_001	EnsemblPlantsGene:GSMUA_Achr6G32510_001	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058
InterPro:Lipase_GDXG_HIS_AS	PANTHER:PTHR23024	PANTHER:PTHR23024:SF113	PFAM:PF07859	ScanProsite:PS01173	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0002960193	UniProt:M0TC45	MapMan:35.1	:	:

Description

Putative Probable gibberellin receptor GID1L3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G32510_001]

Coordinates

chr6:-:31898209..31899268

Molecular Weight (calculated)

31891.0 Da

IEP (calculated)

5.180

GRAVY (calculated)

-0.142

Length

289 amino acids

Sequence
(BLAST)

001: MGHVCAENAS SNSTSFFLQI VEHPDGTVTR PVSPLAPPSG EQSDAPVISK DVPLNPTKNT WLRIYRPNPL PPTRKLPVVI YFHGGGFVIF SAATAFYHNS
101: CEAMTRAVSA LVISLEYRLA PEHRLPAAYE DAVETVLWVQ SQARDPTGGD PWLLPLRLLG LILNQPYFGG VERTPSETRS EEDIILPLRA NDMLWHLALP
201: KGADRDHEFC NPAVAVPPEL RHLPKCLVKG FEGDPLVDRQ REFAKMLERE GASVVVQFDE GGFHAVELFD PATAETLFAE VRQFISGGC

Best Arabidopsis Sequence Match ( AT2G45600.1 )
(BLAST)

001: MEAPPPSSDP YKFLNITLNS DGSLTRHRDF PKLPPTEQSK DIPLNQTNNT FIRIFKPRNI PPESKLPILV YFHGGGFILY SAASAPFHES CTKMADRLQT
101: IILSVEYRLA PEHRLPAAYE DAVEAILWLR DQARGPINGG DCDTWLKDGV DFSKCYVMGS SSGGNIVYNV ALRVVDTDLS PVKIQGLIMN QAFFGGVEPS
201: DSESRLKDDK ICPLPATHLL WSLCLPDGVD RDHVYSNPIK SSGPQEKDKM GRFPSTLING YGGDPLVDRQ RHVAEMLKGR GVHVETRFDK DGFHACELFD
301: GNKAKALYET VEAFMKSCSS TGPSSNSNM

Arabidopsis Description

CXE8Probable carboxylesterase 8 [Source:UniProtKB/Swiss-Prot;Acc:O64640]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.