Factsheet for GSMUA_Achr11P06180_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G199700.1	Wheat	plastid	54.25	47.7
TraesCS2D01G180600.1	Wheat	plastid	53.92	47.41
TraesCS2A01G173400.1	Wheat	plastid	53.27	46.7
EER97518	Sorghum	plastid	52.61	46.67
Zm00001d022101_P001	Maize	cytosol	46.73	46.28
GSMUA_Achr2P05600_001	Banana	plastid	46.73	45.54
GSMUA_Achr9P08260_001	Banana	plastid	33.33	45.13
GSMUA_Achr9P08270_001	Banana	cytosol, plastid	46.41	43.29
Os07t0606800-01	Rice	plastid	51.63	43.05
HORVU2Hr1G032290.4	Barley	plastid	41.18	41.04
GSMUA_Achr6P29040_001	Banana	plastid	40.52	40.39
GSMUA_Achr6P29020_001	Banana	mitochondrion	43.14	38.82
GSMUA_Achr8P05910_001	Banana	cytosol	36.6	36.72
GSMUA_Achr5P27430_001	Banana	cytosol	35.95	35.71
GSMUA_Achr3P24930_001	Banana	cytosol	35.62	35.62
GSMUA_Achr6P16090_001	Banana	cytosol	35.62	35.5
GSMUA_Achr10P...	Banana	cytosol	35.29	34.84
GSMUA_Achr5P27450_001	Banana	mitochondrion	36.27	32.84
GSMUA_Achr7P16460_001	Banana	cytosol	32.35	30.56
GSMUA_Achr2P01900_001	Banana	cytosol	30.72	30.23
GSMUA_Achr10P...	Banana	cytosol	28.43	29.49
GSMUA_Achr6P16980_001	Banana	mitochondrion	27.78	28.72
GSMUA_Achr8P05900_001	Banana	cytosol	25.49	28.57
GSMUA_Achr6P32510_001	Banana	cytosol	26.14	27.68
GSMUA_Achr4P04980_001	Banana	cytosol	28.43	26.93

Protein Annotations

EnsemblPlants:GSMUA_Achr11P06180_001	EnsemblPlants:GSMUA_Achr11T06180_001	EnsemblPlantsGene:GSMUA_Achr11G06180_001	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058
InterPro:Lipase_GDXG_put_SER_AS	PANTHER:PTHR23024	PANTHER:PTHR23024:SF331	PFAM:PF07859	ScanProsite:PS01174	SEG:seg
SUPFAM:SSF53474	UniParc:UPI000294FB91	UniProt:M0RPU8	MapMan:35.1	:	:

Description

Putative Probable gibberellin receptor GID1L3 [Source:GMGC_GENE;Acc:GSMUA_Achr11G06180_001]

Coordinates

chr11:+:4814582..4815607

Molecular Weight (calculated)

33610.7 Da

IEP (calculated)

6.737

GRAVY (calculated)

-0.256

Length

306 amino acids

Sequence
(BLAST)

001: MARSVEKGDS EMATARPPLP LKTRLIIAAI TAATDAACRR DGTVNRRLFN LFDRRTPPNP SPIDGVATAD HTVDPSRHLW LRLFSPASPA PLPLIVYFHG
101: GGFTFHSAAS SPYDGFCRRL ARRVPALVAS VEYRLAPEHR CPASYDDGID VLRWLGNGDL VPDLSAVFLA GDSAGGNIAH HVARRARREA LGRASWMWRS
201: FLPVGADGDH EAANVFGPGS AAADDFEEGF PATMVCVGGW DALQDRQRWY CEGLKRNGVD VRVAEYPDAV HAFYVFPELP DAHKLVDDIA DFVHRRMDEL
301: SKPVDK

Best Arabidopsis Sequence Match ( AT5G23530.1 )
(BLAST)

001: MATDSQPNQK LTLPLKTRIA LTVISTMTDN AQRPDGTINR RFLRLFDFRA PPNPKPVNIV STSDFVVDQS RDLWFRLYTP HVSGDKIPVV VFFHGGGFAF
101: LSPNAYPYDN VCRRFARKLP AYVISVNYRL APEHRYPAQY DDGFDALKYI EENHGSILPA NADLSRCFFA GDSAGGNIAH NVAIRICREP RSSFTAVKLI
201: GLISIQPFFG GEERTEAEKQ LVGAPLVSPD RTDWCWKAMG LNRDHEAVNV GGPNAVDISG LDYPETMVVV AGFDPLKDWQ RSYYEWLKLC GKKATLIEYP
301: NMFHAFYIFP ELPEAGQLIM RIKDFVDERV ASLSA

Arabidopsis Description

CXE18Probable carboxylesterase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9LT10]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.