Factsheet for TraesCS2D01G180600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G199700.1	Wheat	plastid	95.69	95.69
TraesCS2A01G173400.1	Wheat	plastid	95.69	95.42
EER97518	Sorghum	plastid	72.7	73.33
Zm00001d022101_P001	Maize	cytosol	64.37	72.49
HORVU2Hr1G032290.4	Barley	plastid	62.36	70.68
Os07t0606800-01	Rice	plastid	72.13	68.39
GSMUA_Achr11P...	Banana	cytosol	47.41	53.92
TraesCS4D01G087700.1	Wheat	mitochondrion	46.26	47.21
VIT_18s0089g00380.t01	Wine grape	mitochondrion	43.39	45.9
TraesCS2D01G147200.1	Wheat	cytosol	44.25	45.83
KRH09282	Soybean	extracellular	43.39	45.62
TraesCS2D01G147100.1	Wheat	cytosol	45.4	45.01
VIT_18s0089g00390.t01	Wine grape	endoplasmic reticulum, mitochondrion, plastid	41.09	44.69
KRH09281	Soybean	plastid	43.39	44.67
TraesCS4D01G088300.1	Wheat	cytosol	44.25	44.64
VIT_18s0089g00370.t01	Wine grape	cytosol	42.24	44.55
TraesCS2D01G146500.1	Wheat	golgi	44.25	43.5
KRH38783	Soybean	plastid	41.95	43.32
KRH09280	Soybean	plastid	41.95	43.2
TraesCS2D01G146300.1	Wheat	cytosol	45.11	43.01
VIT_07s0130g00320.t01	Wine grape	plastid	41.38	42.99
VIT_18s0089g00400.t01	Wine grape	mitochondrion	41.38	42.48
VIT_07s0130g00340.t01	Wine grape	plastid	40.52	42.09
TraesCS2D01G146400.1	Wheat	cytosol	41.95	41.71
Solyc10g054780.1.1	Tomato	nucleus	41.09	41.33
AT5G23530.1	Thale cress	cytosol	39.08	40.6
CDX80370	Canola	cytosol	39.08	40.6
CDX88032	Canola	cytosol	39.08	40.6
Bra026494.1-P	Field mustard	cytosol	38.79	40.3
Bra009691.1-P	Field mustard	cytosol	38.79	40.3
CDY16855	Canola	cytosol	38.79	40.3
CDX87169	Canola	cytosol	38.79	40.3
KRH38784	Soybean	plastid	41.38	39.89
TraesCS2D01G146600.1	Wheat	plastid	43.39	38.42
TraesCS5D01G435400.1	Wheat	cytosol	35.06	36.53
TraesCS5D01G435500.1	Wheat	cytosol	31.9	35.69
TraesCS3D01G132000.1	Wheat	cytosol	29.89	35.49
TraesCS1D01G254500.1	Wheat	cytosol	35.63	35.03
TraesCS3D01G131900.1	Wheat	cytosol	33.33	34.83
TraesCS4D01G219100.1	Wheat	mitochondrion	34.77	33.7
TraesCS7D01G414500.1	Wheat	cytosol	32.47	33.63
TraesCS3D01G131800.1	Wheat	cytosol	33.33	33.62
TraesCS6D01G310200.1	Wheat	cytosol	32.47	33.53
TraesCS7D01G450900.1	Wheat	cytosol	32.47	33.53
TraesCS6D01G292900.1	Wheat	cytosol	33.62	33.52
TraesCS6D01G277700.1	Wheat	plastid	34.77	33.15
TraesCS2D01G249700.1	Wheat	cytosol	33.05	32.86
TraesCS3D01G516500.1	Wheat	cytosol	31.61	32.84
TraesCS2D01G249500.1	Wheat	mitochondrion, plastid	34.48	32.52
TraesCS4D01G278400.1	Wheat	cytosol	31.03	32.14
TraesCS7D01G271500.1	Wheat	cytosol	31.9	31.44
TraesCS4D01G222700.1	Wheat	peroxisome	29.89	31.42
TraesCS5D01G082900.1	Wheat	cytosol, peroxisome, plasma membrane	31.03	30.34
TraesCS1D01G256400.1	Wheat	cytosol	29.6	28.77
TraesCS1D01G256800.1	Wheat	cytosol	28.45	27.81

Protein Annotations

EnsemblPlants:TraesCS2D01G180600.1	EnsemblPlantsGene:TraesCS2D01G180600	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	InterPro:Lipase_GDXG_HIS_AS
PANTHER:PTHR23024	PANTHER:PTHR23024:SF155	PFAM:PF07859	ScanProsite:PS01173	SEG:seg	SUPFAM:SSF53474
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:125271068..125272114

Molecular Weight (calculated)

36831.4 Da

IEP (calculated)

7.006

GRAVY (calculated)

-0.025

Length

348 amino acids

Sequence
(BLAST)

001: MASSDSPPPG KPPLPWRVRL LVGAASFLHS ASLRADGTVN RSLLSLFERT VPPSPAPDAA GVSSTDHAVS SHLRVRLFVP APAASGSQLP MVVYFHGGGF
101: VFHSVATAQF DALCRRLAAS IPAVVASVDY RLAPEHRAPS AYDDGEAALR WALAGAGGAL PSPPTAVFVA GDSAGGNVAH HVAARLQRDV AGLVLLQPFF
201: GGEARTASEQ RLFHAPFGSP ERLAWLWRAF LPPGATRDHE SANVPDAIQR DGATAAGRWR AFPPTLVCVG GWDVHQDRQR AYANALRAAG AEEVRVAEFP
301: DAIHAFYLFE GLADSQRLLA DVAEFVNRRA AEHLDAPVND QCPLSTGS

Best Arabidopsis Sequence Match ( AT3G05120.1 )
(BLAST)

001: MAASDEVNLI ESRTVVPLNT WVLISNFKVA YNILRRPDGT FNRHLAEYLD RKVTANANPV DGVFSFDVLI DRRINLLSRV YRPAYADQEQ PPSILDLEKP
101: VDGDIVPVIL FFHGGSFAHS SANSAIYDTL CRRLVGLCKC VVVSVNYRRA PENPYPCAYD DGWIALNWVN SRSWLKSKKD SKVHIFLAGD SSGGNIAHNV
201: ALRAGESGID VLGNILLNPM FGGNERTESE KSLDGKYFVT VRDRDWYWKA FLPEGEDREH PACNPFSPRG KSLEGVSFPK SLVVVAGLDL IRDWQLAYAE
301: GLKKAGQEVK LMHLEKATVG FYLLPNNNHF HNVMDEISAF VNAEC

Arabidopsis Description

GID1AGID1A [Source:UniProtKB/TrEMBL;Acc:A0A178VM30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.