Factsheet for TraesCS2D01G146500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G168300.1	Wheat	mitochondrion	93.22	95.1
TraesCS2A01G143200.1	Wheat	golgi	93.5	93.77
Os06t0306600-01	Rice	cytosol	68.64	67.5
TraesCS2D01G147100.1	Wheat	cytosol	65.25	65.81
TraesCS2D01G146600.1	Wheat	plastid	62.99	56.74
TraesCS2D01G147200.1	Wheat	cytosol	53.67	56.55
TraesCS2D01G146400.1	Wheat	cytosol	55.37	56.0
TraesCS2D01G146300.1	Wheat	cytosol	56.21	54.52
TraesCS4D01G087700.1	Wheat	mitochondrion	46.89	48.68
HORVU2Hr1G025380.7	Barley	cytosol	48.31	46.47
TraesCS4D01G088300.1	Wheat	cytosol	45.2	46.38
TraesCS2D01G180600.1	Wheat	plastid	43.5	44.25
TraesCS1D01G254500.1	Wheat	cytosol	35.31	35.31
TraesCS3D01G132000.1	Wheat	cytosol	29.1	35.15
TraesCS3D01G131900.1	Wheat	cytosol	31.92	33.93
TraesCS3D01G131800.1	Wheat	cytosol	32.49	33.33
TraesCS5D01G435400.1	Wheat	cytosol	31.07	32.93
TraesCS4D01G219100.1	Wheat	mitochondrion	33.05	32.59
TraesCS7D01G414500.1	Wheat	cytosol	30.79	32.44
TraesCS5D01G435500.1	Wheat	cytosol	28.25	32.15
TraesCS6D01G292900.1	Wheat	cytosol	31.64	32.09
TraesCS7D01G271500.1	Wheat	cytosol	31.64	31.73
TraesCS2D01G249700.1	Wheat	cytosol	31.36	31.71
TraesCS6D01G310200.1	Wheat	cytosol	29.38	30.86
TraesCS6D01G277700.1	Wheat	plastid	31.36	30.41
TraesCS4D01G278400.1	Wheat	cytosol	28.53	30.06
TraesCS7D01G450900.1	Wheat	cytosol	28.25	29.67
TraesCS3D01G516500.1	Wheat	cytosol	27.97	29.55
TraesCS2D01G249500.1	Wheat	mitochondrion, plastid	30.79	29.54
TraesCS4D01G222700.1	Wheat	peroxisome	25.99	27.79
TraesCS1D01G256400.1	Wheat	cytosol	26.84	26.54
TraesCS5D01G082900.1	Wheat	cytosol, peroxisome, plasma membrane	25.71	25.56
TraesCS1D01G256800.1	Wheat	cytosol	25.14	25.0

Protein Annotations

EnsemblPlants:TraesCS2D01G146500.1	EnsemblPlantsGene:TraesCS2D01G146500	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	InterPro:Lipase_GDXG_HIS_AS
PANTHER:PTHR23024	PANTHER:PTHR23024:SF216	PFAM:PF07859	ScanProsite:PS01173	SUPFAM:SSF53474	MapMan:35.1

Description

No Description!

Coordinates

chr2D:+:87806089..87807543

Molecular Weight (calculated)

38159.3 Da

IEP (calculated)

6.958

GRAVY (calculated)

-0.052

Length

354 amino acids

Sequence
(BLAST)

001: MAGDVARKQL QARVGALPWA VRLQLRALEA AVDATQRRDG TVNRFLFSLL VDRQAPANPA RPDAGGVRSV DVTVDASTGV RARVYFATGE AGAEADASPR
101: PVIVYFHGGG FTVFSAATRP YDALCRTMCR EAGAVVVSVT YRLAPEHRYP AAYDDGEAAL RYLAATGLPA EVPVRVDLSR CFLAGDSAGA NIAHHVAQRW
201: IAAPATTPPA VHLAGLLLLS AYFGGEDRTE SEQALEGVAP IVNLRRSDFW WKAFLPEGAD RNHPAAHVTG EAGTEPELPE AFPRAMVVVG GLDPLQDWGR
301: RYAAMLRRKG KEVRVVEFTE AVHAFYFFPA LPETGKLVAE IRAFVESVAP NQTT

Best Arabidopsis Sequence Match ( AT3G05120.1 )
(BLAST)

001: MAASDEVNLI ESRTVVPLNT WVLISNFKVA YNILRRPDGT FNRHLAEYLD RKVTANANPV DGVFSFDVLI DRRINLLSRV YRPAYADQEQ PPSILDLEKP
101: VDGDIVPVIL FFHGGSFAHS SANSAIYDTL CRRLVGLCKC VVVSVNYRRA PENPYPCAYD DGWIALNWVN SRSWLKSKKD SKVHIFLAGD SSGGNIAHNV
201: ALRAGESGID VLGNILLNPM FGGNERTESE KSLDGKYFVT VRDRDWYWKA FLPEGEDREH PACNPFSPRG KSLEGVSFPK SLVVVAGLDL IRDWQLAYAE
301: GLKKAGQEVK LMHLEKATVG FYLLPNNNHF HNVMDEISAF VNAEC

Arabidopsis Description

GID1AGID1A [Source:UniProtKB/TrEMBL;Acc:A0A178VM30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.