Factsheet for TraesCS4D01G088300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G224900.1	Wheat	cytosol	96.52	97.08
TraesCS4B01G091200.1	Wheat	cytosol	96.81	96.81
TraesCS4A01G225000.1	Wheat	cytosol	81.74	93.69
HORVU4Hr1G015560.1	Barley	plastid	93.62	82.19
Zm00001d007257_P001	Maize	plastid	77.97	77.75
EES08278	Sorghum	plastid	78.26	77.14
Os11t0239500-01	Rice	plasma membrane	76.23	71.66
TraesCS4D01G087700.1	Wheat	mitochondrion	67.83	68.62
VIT_07s0130g00320.t01	Wine grape	plastid	48.41	49.85
VIT_07s0130g00340.t01	Wine grape	plastid	47.54	48.96
CDX87169	Canola	cytosol	46.38	47.76
Bra026494.1-P	Field mustard	cytosol	46.09	47.46
CDY16855	Canola	cytosol	46.09	47.46
VIT_18s0089g00370.t01	Wine grape	cytosol	45.22	47.27
TraesCS2D01G146400.1	Wheat	cytosol	47.25	46.57
CDX80370	Canola	cytosol	45.22	46.57
CDX88032	Canola	cytosol	45.22	46.57
KRH09281	Soybean	plastid	45.51	46.45
TraesCS2D01G147200.1	Wheat	cytosol	45.22	46.43
AT5G23530.1	Thale cress	cytosol	44.93	46.27
Solyc10g054780.1.1	Tomato	nucleus	46.38	46.24
TraesCS2D01G147100.1	Wheat	cytosol	46.96	46.15
Bra009691.1-P	Field mustard	cytosol	44.64	45.97
VIT_18s0089g00390.t01	Wine grape	endoplasmic reticulum, mitochondrion, plastid	42.61	45.94
KRH09280	Soybean	plastid	44.64	45.56
KRH38783	Soybean	plastid	44.35	45.4
TraesCS2D01G146500.1	Wheat	golgi	46.38	45.2
VIT_18s0089g00380.t01	Wine grape	mitochondrion	42.32	44.38
TraesCS2D01G180600.1	Wheat	plastid	44.64	44.25
TraesCS2D01G146300.1	Wheat	cytosol	46.67	44.11
KRH09282	Soybean	extracellular	41.74	43.5
VIT_18s0089g00400.t01	Wine grape	mitochondrion	42.32	43.07
TraesCS2D01G146600.1	Wheat	plastid	47.54	41.73
KRH38784	Soybean	plastid	41.74	39.89
TraesCS1D01G254500.1	Wheat	cytosol	36.23	35.31
TraesCS5D01G435400.1	Wheat	cytosol	32.75	33.83
TraesCS3D01G132000.1	Wheat	cytosol	28.41	33.45
TraesCS3D01G131900.1	Wheat	cytosol	32.17	33.33
TraesCS5D01G435500.1	Wheat	cytosol	29.86	33.12
TraesCS4D01G219100.1	Wheat	mitochondrion	33.33	32.03
TraesCS3D01G131800.1	Wheat	cytosol	31.88	31.88
TraesCS6D01G277700.1	Wheat	plastid	33.62	31.78
TraesCS7D01G271500.1	Wheat	cytosol	32.46	31.73
TraesCS7D01G414500.1	Wheat	cytosol	30.72	31.55
TraesCS6D01G310200.1	Wheat	cytosol	30.43	31.16
TraesCS7D01G450900.1	Wheat	cytosol	30.14	30.86
TraesCS3D01G516500.1	Wheat	cytosol	29.57	30.45
TraesCS6D01G292900.1	Wheat	cytosol	30.72	30.37
TraesCS2D01G249500.1	Wheat	mitochondrion, plastid	31.3	29.27
TraesCS4D01G278400.1	Wheat	cytosol	28.41	29.17
TraesCS2D01G249700.1	Wheat	cytosol	29.57	29.14
TraesCS4D01G222700.1	Wheat	peroxisome	27.25	28.4
TraesCS5D01G082900.1	Wheat	cytosol, peroxisome, plasma membrane	27.83	26.97
TraesCS1D01G256400.1	Wheat	cytosol	27.83	26.82
TraesCS1D01G256800.1	Wheat	cytosol	27.54	26.69

Protein Annotations

EnsemblPlants:TraesCS4D01G088300.1	EnsemblPlantsGene:TraesCS4D01G088300	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	PANTHER:PTHR23024
PANTHER:PTHR23024:SF159	PFAM:PF07859	SEG:seg	SUPFAM:SSF53474	MapMan:35.1	:

Description

No Description!

Coordinates

chr4D:-:63572701..63573738

Molecular Weight (calculated)

37519.5 Da

IEP (calculated)

6.944

GRAVY (calculated)

-0.189

Length

345 amino acids

Sequence
(BLAST)

001: MAEEPPPGSR PKPPMSRIMR LSLRAVDYVA DATRRADGTV NRRVLSLLDP RVPAFSSPCR GVASRDVVID PTLRVRARLF HPARPGDAKG APLPVIVFFH
101: GGGFAFLSAA SLAYDAACRR IARYASAAVL SVDYRRAPEH RFPAPYDDGL AALRFLDDPN NHPADAPLAT SRCFLAGDSA GGNIAHHVAR RYAADVPAFK
201: NVRLAGVIAI QPFFGGEERT PSELRLDGAQ IVSVSRTDWM WRAFLPDGAD RTHEAACFTS PGAAAGMDSP AFPPVLLVIG GYDPLQDWQR RYCEVLKDSG
301: KDVRVLEYPD GIHAFFLFPG FDDARNLMTR IAEFVGESDD DGGSE

Best Arabidopsis Sequence Match ( AT5G27320.1 )
(BLAST)

001: MAGSEEVNLI ESKTVVPLNT WVLISNFKLA YNLLRRPDGT FNRHLAEFLD RKVPANANPV NGVFSFDVII DRQTNLLSRV YRPADAGTSP SITDLQNPVD
101: GEIVPVIVFF HGGSFAHSSA NSAIYDTLCR RLVGLCGAVV VSVNYRRAPE NRYPCAYDDG WAVLKWVNSS SWLRSKKDSK VRIFLAGDSS GGNIVHNVAV
201: RAVESRIDVL GNILLNPMFG GTERTESEKR LDGKYFVTVR DRDWYWRAFL PEGEDREHPA CSPFGPRSKS LEGLSFPKSL VVVAGLDLIQ DWQLKYAEGL
301: KKAGQEVKLL YLEQATIGFY LLPNNNHFHT VMDEIAAFVN AECQ

Arabidopsis Description

GID1CGID1C [Source:UniProtKB/TrEMBL;Acc:A0A178UKX0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.