Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G088300.1 | Wheat | cytosol | 96.81 | 96.81 |
| TraesCS4A01G224900.1 | Wheat | cytosol | 95.94 | 96.5 |
| TraesCS4A01G225000.1 | Wheat | cytosol | 81.45 | 93.36 |
| HORVU4Hr1G015560.1 | Barley | plastid | 93.33 | 81.93 |
| Zm00001d007257_P001 | Maize | plastid | 77.39 | 77.17 |
| EES08278 | Sorghum | plastid | 77.68 | 76.57 |
| Os11t0239500-01 | Rice | plasma membrane | 76.52 | 71.93 |
| TraesCS4B01G090600.1 | Wheat | mitochondrion | 66.96 | 67.74 |
| VIT_07s0130g00320.t01 | Wine grape | plastid | 48.99 | 50.45 |
| VIT_07s0130g00340.t01 | Wine grape | plastid | 48.12 | 49.55 |
| CDX87169 | Canola | cytosol | 46.38 | 47.76 |
| VIT_18s0089g00370.t01 | Wine grape | cytosol | 45.51 | 47.58 |
| CDY16855 | Canola | cytosol | 46.09 | 47.46 |
| Bra026494.1-P | Field mustard | cytosol | 46.09 | 47.46 |
| TraesCS2B01G168600.1 | Wheat | cytosol | 45.51 | 46.73 |
| TraesCS7B01G058600.1 | Wheat | cytosol | 48.12 | 46.63 |
| CDX88032 | Canola | cytosol | 45.22 | 46.57 |
| CDX80370 | Canola | cytosol | 45.22 | 46.57 |
| Solyc10g054780.1.1 | Tomato | nucleus | 46.67 | 46.53 |
| KRH09281 | Soybean | plastid | 45.51 | 46.45 |
| AT5G23530.1 | Thale cress | cytosol | 44.93 | 46.27 |
| VIT_18s0089g00390.t01 | Wine grape | endoplasmic reticulum, mitochondrion, plastid | 42.9 | 46.25 |
| TraesCS2B01G168500.1 | Wheat | cytosol | 47.83 | 46.22 |
| KRH09280 | Soybean | plastid | 45.22 | 46.15 |
| Bra009691.1-P | Field mustard | cytosol | 44.64 | 45.97 |
| TraesCS2B01G168300.1 | Wheat | mitochondrion | 46.09 | 45.82 |
| KRH38783 | Soybean | plastid | 44.64 | 45.7 |
| TraesCS2B01G199700.1 | Wheat | plastid | 44.64 | 44.25 |
| VIT_18s0089g00380.t01 | Wine grape | mitochondrion | 42.03 | 44.07 |
| TraesCS2B01G168200.1 | Wheat | cytosol | 46.67 | 43.63 |
| KRH09282 | Soybean | extracellular | 41.74 | 43.5 |
| VIT_18s0089g00400.t01 | Wine grape | mitochondrion | 42.03 | 42.77 |
| KRH38784 | Soybean | plastid | 41.74 | 39.89 |
| TraesCS1B01G265900.1 | Wheat | cytosol | 35.65 | 34.65 |
| TraesCS3B01G150200.1 | Wheat | cytosol | 32.17 | 33.23 |
| TraesCS3B01G150100.1 | Wheat | cytosol | 31.3 | 33.03 |
| TraesCS5B01G429400.1 | Wheat | cytosol | 31.88 | 32.93 |
| TraesCS3B01G150500.1 | Wheat | cytosol | 31.01 | 32.72 |
| TraesCS3B01G150400.1 | Wheat | cytosol | 31.3 | 32.43 |
| TraesCS4B01G218900.1 | Wheat | mitochondrion | 33.04 | 31.84 |
| TraesCS6B01G429500.1 | Wheat | plastid | 32.46 | 31.73 |
| TraesCS6B01G429700.1 | Wheat | plastid | 32.17 | 31.44 |
| TraesCS7B01G322700.1 | Wheat | cytosol | 30.43 | 31.25 |
| TraesCS7B01G363800.1 | Wheat | cytosol | 31.01 | 31.2 |
| TraesCS7B01G169300.1 | Wheat | cytosol, peroxisome, plastid | 31.59 | 30.88 |
| TraesCS3B01G150000.1 | Wheat | cytosol | 29.57 | 30.82 |
| TraesCS3B01G577500.1 | Wheat | cytosol | 29.57 | 30.45 |
| TraesCS6B01G343600.1 | Wheat | cytosol | 30.72 | 30.37 |
| TraesCS4B01G222200.1 | Wheat | peroxisome | 27.25 | 28.57 |
| TraesCS2B01G263100.1 | Wheat | plastid | 31.59 | 27.95 |
| TraesCS1B01G267600.1 | Wheat | cytosol | 28.12 | 27.17 |
| TraesCS5B01G076700.1 | Wheat | cytosol, peroxisome, plasma membrane | 27.25 | 26.4 |
| TraesCS1B01G268000.1 | Wheat | cytosol, plastid | 26.67 | 25.84 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G091200.1 | EnsemblPlantsGene:TraesCS4B01G091200 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016787 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_3 | InterPro:IPR029058 | PANTHER:PTHR23024 |
| PANTHER:PTHR23024:SF159 | PFAM:PF07859 | SEG:seg | SUPFAM:SSF53474 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr4B:-:94100029..94101066
Molecular Weight (calculated)
37616.5 Da
IEP (calculated)
7.568
GRAVY (calculated)
-0.203
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEPPPGSR PKPPMSRITR LSLRAVDYVA DATRRADGTV NRRVLSLLDP RVPAFSSPCR GVASRDVVID PTLRIRARLF HPARPAGDAK GAPLPVIVFF
101: HGGGFAFLSA ASLAYDAACR RIARYASAAV LSVDYRRAPE HRFPAPYDDG LAALRFLDDP NNHPADVPLQ TSRCYLAGDS AGGNIAHHVA RRYAADVPAF
201: KNVRLAGVIA IQPFFGGEER TPSEFRLDGA PIVSVSRTDW MWRAFLPDGA DRTHEAACFT SPRAAAGVDS PAFPPVLLVI GGYDPLQDWQ RRYCEVLKDS
301: GKDVRVLEYP DGIHAFFLFP GFDDARNLMT RIAEFVGESD DGGSD
101: HGGGFAFLSA ASLAYDAACR RIARYASAAV LSVDYRRAPE HRFPAPYDDG LAALRFLDDP NNHPADVPLQ TSRCYLAGDS AGGNIAHHVA RRYAADVPAF
201: KNVRLAGVIA IQPFFGGEER TPSEFRLDGA PIVSVSRTDW MWRAFLPDGA DRTHEAACFT SPRAAAGVDS PAFPPVLLVI GGYDPLQDWQ RRYCEVLKDS
301: GKDVRVLEYP DGIHAFFLFP GFDDARNLMT RIAEFVGESD DGGSD
001: MAGGNEVNLN ECKRIVPLNT WVLISNFKLA YKVLRRPDGS FNRDLAEFLD RKVPANSFPL DGVFSFDHVD STTNLLTRIY QPASLLHQTR HGTLELTKPL
101: STTEIVPVLI FFHGGSFTHS SANSAIYDTF CRRLVTICGV VVVSVDYRRS PEHRYPCAYD DGWNALNWVK SRVWLQSGKD SNVYVYLAGD SSGGNIAHNV
201: AVRATNEGVK VLGNILLHPM FGGQERTQSE KTLDGKYFVT IQDRDWYWRA YLPEGEDRDH PACNPFGPRG QSLKGVNFPK SLVVVAGLDL VQDWQLAYVD
301: GLKKTGLEVN LLYLKQATIG FYFLPNNDHF HCLMEELNKF VHSIEDSQSK SSPVLLTP
101: STTEIVPVLI FFHGGSFTHS SANSAIYDTF CRRLVTICGV VVVSVDYRRS PEHRYPCAYD DGWNALNWVK SRVWLQSGKD SNVYVYLAGD SSGGNIAHNV
201: AVRATNEGVK VLGNILLHPM FGGQERTQSE KTLDGKYFVT IQDRDWYWRA YLPEGEDRDH PACNPFGPRG QSLKGVNFPK SLVVVAGLDL VQDWQLAYVD
301: GLKKTGLEVN LLYLKQATIG FYFLPNNDHF HCLMEELNKF VHSIEDSQSK SSPVLLTP
Arabidopsis Description
GID1BGibberellin receptor GID1B [Source:UniProtKB/Swiss-Prot;Acc:Q9LYC1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.