Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G254500.1 | Wheat | cytosol | 97.46 | 97.74 |
| TraesCS1A01G255100.1 | Wheat | cytosol | 96.62 | 96.62 |
| HORVU1Hr1G060810.1 | Barley | cytosol | 96.06 | 96.33 |
| KXG21982 | Sorghum | cytosol | 83.1 | 83.1 |
| Os05t0407500-01 | Rice | cytosol, nucleus | 82.54 | 82.77 |
| Zm00001d038165_P003 | Maize | cytosol | 80.85 | 81.77 |
| Zm00001d010308_P001 | Maize | cytosol, plastid | 78.59 | 79.71 |
| GSMUA_Achr3P24930_001 | Banana | cytosol | 60.28 | 69.93 |
| GSMUA_Achr6P16090_001 | Banana | cytosol | 59.15 | 68.4 |
| GSMUA_Achr10P... | Banana | cytosol | 59.15 | 67.74 |
| GSMUA_Achr5P27430_001 | Banana | cytosol | 58.59 | 67.53 |
| GSMUA_Achr8P05910_001 | Banana | cytosol | 57.75 | 67.21 |
| AT3G05120.1 | Thale cress | cytosol | 61.97 | 63.77 |
| AT5G27320.1 | Thale cress | cytosol | 61.41 | 63.37 |
| CDX80665 | Canola | cytosol | 61.13 | 63.08 |
| VIT_07s0104g00930.t01 | Wine grape | cytosol | 61.13 | 63.08 |
| Bra009970.1-P | Field mustard | cytosol | 61.13 | 62.9 |
| CDY27795 | Canola | cytosol | 61.13 | 62.72 |
| CDY16687 | Canola | cytosol | 60.85 | 62.61 |
| GSMUA_Achr5P27450_001 | Banana | mitochondrion | 59.15 | 62.13 |
| Solyc06g008870.2.1 | Tomato | cytosol | 60.28 | 62.03 |
| KRH31953 | Soybean | cytosol | 59.72 | 61.81 |
| PGSC0003DMT400056562 | Potato | cytosol | 60.0 | 61.74 |
| KRH71503 | Soybean | cytosol | 59.44 | 61.7 |
| CDY41936 | Canola | cytosol | 60.28 | 61.67 |
| PGSC0003DMT400073501 | Potato | cytosol | 60.28 | 61.49 |
| KRG92803 | Soybean | cytosol | 59.44 | 61.34 |
| KRH33997 | Soybean | cytosol | 59.44 | 61.34 |
| Solyc01g098390.2.1 | Tomato | cytosol | 60.0 | 61.03 |
| PGSC0003DMT400009831 | Potato | cytosol | 58.59 | 60.29 |
| KRH67123 | Soybean | cytosol | 58.59 | 60.12 |
| Solyc09g074270.2.1 | Tomato | cytosol | 57.18 | 58.84 |
| CDY67478 | Canola | cytosol | 58.87 | 58.38 |
| CDY63333 | Canola | cytosol | 58.59 | 58.1 |
| AT3G63010.1 | Thale cress | cytosol | 58.59 | 58.1 |
| VIT_14s0030g00440.t01 | Wine grape | cytosol | 61.41 | 57.82 |
| Bra007722.1-P | Field mustard | cytosol | 58.31 | 57.82 |
| CDX89165 | Canola | cytosol | 58.31 | 57.5 |
| Bra040420.1-P | Field mustard | cytosol | 58.31 | 57.5 |
| CDX67913 | Canola | cytosol | 57.18 | 56.7 |
| Bra003520.1-P | Field mustard | cytosol | 57.18 | 56.7 |
| CDY70667 | Canola | cytosol | 56.9 | 56.42 |
| CDX93945 | Canola | extracellular, golgi | 55.77 | 55.62 |
| Bra039460.1-P | Field mustard | cytosol | 61.13 | 54.8 |
| TraesCS2B01G168300.1 | Wheat | mitochondrion | 34.93 | 35.73 |
| TraesCS4B01G091200.1 | Wheat | cytosol | 34.65 | 35.65 |
| TraesCS2B01G168600.1 | Wheat | cytosol | 33.52 | 35.42 |
| TraesCS7B01G058600.1 | Wheat | cytosol | 35.49 | 35.39 |
| TraesCS2B01G199700.1 | Wheat | plastid | 34.65 | 35.34 |
| TraesCS2B01G168500.1 | Wheat | cytosol | 35.49 | 35.29 |
| TraesCS4B01G090600.1 | Wheat | mitochondrion | 32.96 | 34.31 |
| TraesCS2B01G168200.1 | Wheat | cytosol | 35.21 | 33.88 |
| TraesCS5B01G429400.1 | Wheat | cytosol | 30.14 | 32.04 |
| TraesCS3B01G150500.1 | Wheat | cytosol | 27.61 | 29.97 |
| TraesCS6B01G343600.1 | Wheat | cytosol | 29.3 | 29.8 |
| TraesCS3B01G150200.1 | Wheat | cytosol | 27.89 | 29.64 |
| TraesCS3B01G150100.1 | Wheat | cytosol | 27.04 | 29.36 |
| TraesCS3B01G150400.1 | Wheat | cytosol | 27.32 | 29.13 |
| TraesCS4B01G218900.1 | Wheat | mitochondrion | 29.3 | 29.05 |
| TraesCS7B01G322700.1 | Wheat | cytosol | 27.32 | 28.87 |
| TraesCS3B01G150000.1 | Wheat | cytosol | 26.48 | 28.4 |
| TraesCS6B01G429500.1 | Wheat | plastid | 28.17 | 28.33 |
| TraesCS3B01G577500.1 | Wheat | cytosol | 26.48 | 28.06 |
| TraesCS6B01G429700.1 | Wheat | plastid | 27.89 | 28.05 |
| TraesCS2B01G263100.1 | Wheat | plastid | 29.3 | 26.67 |
| TraesCS7B01G169300.1 | Wheat | cytosol, peroxisome, plastid | 26.48 | 26.63 |
| TraesCS1B01G267600.1 | Wheat | cytosol | 26.48 | 26.33 |
| TraesCS7B01G363800.1 | Wheat | cytosol | 25.35 | 26.24 |
| TraesCS1B01G268000.1 | Wheat | cytosol, plastid | 25.92 | 25.84 |
| TraesCS5B01G076700.1 | Wheat | cytosol, peroxisome, plasma membrane | 25.35 | 25.28 |
| TraesCS4B01G222200.1 | Wheat | peroxisome | 23.1 | 24.92 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G265900.1 | EnsemblPlantsGene:TraesCS1B01G265900 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0010331 | GO:GO:0016787 | InterPro:AB_hydrolase |
| InterPro:AB_hydrolase_3 | InterPro:IPR029058 | InterPro:Lipase_GDXG_put_SER_AS | PANTHER:PTHR23024 | PANTHER:PTHR23024:SF227 | PFAM:PF07859 |
| ScanProsite:PS01174 | SEG:seg | SUPFAM:SSF53474 | MapMan:11.6.2.1 | : | : |
Description
No Description!
Coordinates
chr1B:+:466936456..466938147
Molecular Weight (calculated)
39480.8 Da
IEP (calculated)
6.510
GRAVY (calculated)
-0.274
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSDEVNRN ECKTVVPLHT WVLISNFKVS YHMLRRPDGT FERDLAEYMD RRVPANPRPV EGVSSFDHFI DLSVGLEARI YRAVAGNAAG AAEGAAALTL
101: PILEFLGGAP SPDPLPVIIF FHGGSFAHSA SSTTIYDNLC RQLVKLSKGV VVSVNYRRAP EHRYPCAYDD GWTALKWAQA QPFLRSGEDA QLRVFLAGDS
201: SGGNIAHHVA VRAAEEGIKI HGNILLNAMF GGNERTESER RLDGKYFVTL QDRDWYWKAY LPEDADRDHP ACNPFGPNGR RLKGLPFAKS LIIVSGLDLT
301: CDRQLGYAEG LREDGHDVKL VHREKATIGF YLLSNTDHYH EVMEEIAEFV RANLL
101: PILEFLGGAP SPDPLPVIIF FHGGSFAHSA SSTTIYDNLC RQLVKLSKGV VVSVNYRRAP EHRYPCAYDD GWTALKWAQA QPFLRSGEDA QLRVFLAGDS
201: SGGNIAHHVA VRAAEEGIKI HGNILLNAMF GGNERTESER RLDGKYFVTL QDRDWYWKAY LPEDADRDHP ACNPFGPNGR RLKGLPFAKS LIIVSGLDLT
301: CDRQLGYAEG LREDGHDVKL VHREKATIGF YLLSNTDHYH EVMEEIAEFV RANLL
001: MAGSEEVNLI ESKTVVPLNT WVLISNFKLA YNLLRRPDGT FNRHLAEFLD RKVPANANPV NGVFSFDVII DRQTNLLSRV YRPADAGTSP SITDLQNPVD
101: GEIVPVIVFF HGGSFAHSSA NSAIYDTLCR RLVGLCGAVV VSVNYRRAPE NRYPCAYDDG WAVLKWVNSS SWLRSKKDSK VRIFLAGDSS GGNIVHNVAV
201: RAVESRIDVL GNILLNPMFG GTERTESEKR LDGKYFVTVR DRDWYWRAFL PEGEDREHPA CSPFGPRSKS LEGLSFPKSL VVVAGLDLIQ DWQLKYAEGL
301: KKAGQEVKLL YLEQATIGFY LLPNNNHFHT VMDEIAAFVN AECQ
101: GEIVPVIVFF HGGSFAHSSA NSAIYDTLCR RLVGLCGAVV VSVNYRRAPE NRYPCAYDDG WAVLKWVNSS SWLRSKKDSK VRIFLAGDSS GGNIVHNVAV
201: RAVESRIDVL GNILLNPMFG GTERTESEKR LDGKYFVTVR DRDWYWRAFL PEGEDREHPA CSPFGPRSKS LEGLSFPKSL VVVAGLDLIQ DWQLKYAEGL
301: KKAGQEVKLL YLEQATIGFY LLPNNNHFHT VMDEIAAFVN AECQ
Arabidopsis Description
GID1CGID1C [Source:UniProtKB/TrEMBL;Acc:A0A178UKX0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.