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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY63333 Canola cytosol 98.04 98.04
Bra040420.1-P Field mustard cytosol 91.62 91.11
Bra003520.1-P Field mustard cytosol 90.5 90.5
AT3G63010.1 Thale cress cytosol 90.5 90.5
VIT_07s0104g00930.t01 Wine grape cytosol 74.3 77.33
Solyc06g008870.2.1 Tomato cytosol 74.3 77.1
PGSC0003DMT400056562 Potato cytosol 74.02 76.81
PGSC0003DMT400009831 Potato cytosol 73.46 76.23
Solyc09g074270.2.1 Tomato cytosol 71.79 74.49
KRH71503 Soybean cytosol 70.39 73.68
KRH31953 Soybean cytosol 69.27 72.3
KRH67123 Soybean cytosol 69.55 71.97
Bra009970.1-P Field mustard cytosol 68.44 71.01
GSMUA_Achr3P24930_001 Banana cytosol 56.98 66.67
GSMUA_Achr6P16090_001 Banana cytosol 56.7 66.12
GSMUA_Achr5P27430_001 Banana cytosol 56.42 65.58
GSMUA_Achr8P05910_001 Banana cytosol 55.87 65.57
GSMUA_Achr10P... Banana cytosol 55.87 64.52
GSMUA_Achr5P27450_001 Banana mitochondrion 56.15 59.47
Os05t0407500-01 Rice cytosol, nucleus 58.38 59.04
Zm00001d010308_P001 Maize cytosol, plastid 57.54 58.86
KXG21982 Sorghum cytosol 58.1 58.59
HORVU1Hr1G060810.1 Barley cytosol 57.82 58.47
Zm00001d038165_P003 Maize cytosol 57.26 58.4
TraesCS1B01G265900.1 Wheat cytosol 57.82 58.31
TraesCS1D01G254500.1 Wheat cytosol 56.98 57.63
TraesCS1A01G255100.1 Wheat cytosol 56.98 57.46
Bra039460.1-P Field mustard cytosol 63.13 57.07
Bra026494.1-P Field mustard cytosol 36.31 38.81
Bra009691.1-P Field mustard cytosol 35.2 37.61
Bra009207.1-P Field mustard cytosol 29.33 31.63
Bra005899.1-P Field mustard cytosol 29.33 31.44
Bra035904.1-P Field mustard cytosol 28.21 30.79
Bra008651.1-P Field mustard cytosol 28.49 30.72
Bra029278.1-P Field mustard cytosol 27.09 30.12
Bra004924.1-P Field mustard cytosol 26.54 29.32
Bra004026.1-P Field mustard cytosol 25.7 28.05
Bra004925.1-P Field mustard cytosol 24.02 26.54
Bra027693.1-P Field mustard cytosol 24.58 26.11
Bra038363.1-P Field mustard cytosol 24.58 26.11
Bra004327.1-P Field mustard cytosol 24.3 26.05
Bra004326.1-P Field mustard cytosol 24.3 26.05
Bra029276.1-P Field mustard cytosol 19.83 26.01
Protein Annotations
EnsemblPlants:Bra007722.1EnsemblPlants:Bra007722.1-PEnsemblPlantsGene:Bra007722Gene3D:3.40.50.1820GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:AB_hydrolaseInterPro:AB_hydrolase_3InterPro:IPR029058
InterPro:Lipase_GDXG_HIS_ASInterPro:Lipase_GDXG_put_SER_ASPANTHER:PTHR23024PANTHER:PTHR23024:SF353PFAM:PF07859ScanProsite:PS01173
ScanProsite:PS01174SUPFAM:SSF53474UniParc:UPI0002542B9AUniProt:M4CU28MapMan:11.6.2.1:
Description
AT3G63010 (E=2e-194) ATGID1B, GID1B | GID1B (GA INSENSITIVE DWARF1B); hydrolase
Coordinates
chrA09:+:30555694..30556979
Molecular Weight (calculated)
40215.6 Da
IEP (calculated)
6.748
GRAVY (calculated)
-0.260
Length
358 amino acids
Sequence
(BLAST)
001: MAGGNEVNLN ECKRIVPLNT WVPISNFKLP YTLLRRPDGS FNRDLAEFLD RKVPANSFPV DGVFSFDHVD TSTNLLTRIY LPAPLDPSRH GSVDLTEPLS
101: TTDVAPVLVF FHGGSFTHSS ADSAIYDTFC RRLVTICGVV VVSVDYRRSP EHRYPCAYDD GWNALKWVKS RVWLQSGKDS NVYVYLAGDS SGGNIAHNVA
201: VRATNEGVKV LGNILLHPMF GGLERTQSEK RLDGKYFVTI HDRDWYWRAY LPEGEDRDHP ACNPFGPRGQ SLEGVKFPKS LVVVAGLDLV QDWQLAYVDG
301: LKRTGHHVNL LYLKQATIGF YFLPNNDHFH CLMDELTKFV HSIDEDSQSK SSPVLLTP
Best Arabidopsis Sequence Match ( AT3G63010.1 )
(BLAST)
001: MAGGNEVNLN ECKRIVPLNT WVLISNFKLA YKVLRRPDGS FNRDLAEFLD RKVPANSFPL DGVFSFDHVD STTNLLTRIY QPASLLHQTR HGTLELTKPL
101: STTEIVPVLI FFHGGSFTHS SANSAIYDTF CRRLVTICGV VVVSVDYRRS PEHRYPCAYD DGWNALNWVK SRVWLQSGKD SNVYVYLAGD SSGGNIAHNV
201: AVRATNEGVK VLGNILLHPM FGGQERTQSE KTLDGKYFVT IQDRDWYWRA YLPEGEDRDH PACNPFGPRG QSLKGVNFPK SLVVVAGLDL VQDWQLAYVD
301: GLKKTGLEVN LLYLKQATIG FYFLPNNDHF HCLMEELNKF VHSIEDSQSK SSPVLLTP
Arabidopsis Description
GID1BGibberellin receptor GID1B [Source:UniProtKB/Swiss-Prot;Acc:Q9LYC1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.