Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH71503 | Soybean | cytosol | 95.92 | 96.2 |
| VIT_07s0104g00930.t01 | Wine grape | cytosol | 81.92 | 81.69 |
| KRH67123 | Soybean | cytosol | 80.17 | 79.48 |
| Solyc06g008870.2.1 | Tomato | cytosol | 78.13 | 77.68 |
| PGSC0003DMT400009831 | Potato | cytosol | 77.84 | 77.39 |
| PGSC0003DMT400056562 | Potato | cytosol | 77.84 | 77.39 |
| Solyc09g074270.2.1 | Tomato | cytosol | 76.97 | 76.52 |
| KRH33997 | Soybean | cytosol | 71.72 | 71.51 |
| AT3G63010.1 | Thale cress | cytosol | 74.34 | 71.23 |
| KRG92803 | Soybean | cytosol | 71.14 | 70.93 |
| CDY67478 | Canola | cytosol | 73.76 | 70.67 |
| Bra003520.1-P | Field mustard | cytosol | 73.47 | 70.39 |
| CDX67913 | Canola | cytosol | 73.47 | 70.39 |
| CDY63333 | Canola | cytosol | 73.47 | 70.39 |
| CDX89165 | Canola | cytosol | 73.18 | 69.72 |
| CDY70667 | Canola | cytosol | 72.59 | 69.55 |
| Bra007722.1-P | Field mustard | cytosol | 72.3 | 69.27 |
| Bra040420.1-P | Field mustard | cytosol | 72.59 | 69.17 |
| CDX93945 | Canola | extracellular, golgi | 70.55 | 67.98 |
| GSMUA_Achr3P24930_001 | Banana | cytosol | 60.64 | 67.97 |
| GSMUA_Achr5P27430_001 | Banana | cytosol | 60.93 | 67.86 |
| GSMUA_Achr6P16090_001 | Banana | cytosol | 59.77 | 66.78 |
| GSMUA_Achr10P... | Banana | cytosol | 60.35 | 66.77 |
| GSMUA_Achr8P05910_001 | Banana | cytosol | 58.02 | 65.25 |
| GSMUA_Achr5P27450_001 | Banana | mitochondrion | 61.22 | 62.13 |
| TraesCS1B01G265900.1 | Wheat | cytosol | 61.81 | 59.72 |
| Os05t0407500-01 | Rice | cytosol, nucleus | 61.52 | 59.6 |
| TraesCS1A01G255100.1 | Wheat | cytosol | 61.22 | 59.15 |
| TraesCS1D01G254500.1 | Wheat | cytosol | 60.93 | 59.04 |
| HORVU1Hr1G060810.1 | Barley | cytosol | 60.93 | 59.04 |
| KXG21982 | Sorghum | cytosol | 60.93 | 58.87 |
| Zm00001d010308_P001 | Maize | cytosol, plastid | 60.06 | 58.86 |
| Zm00001d038165_P003 | Maize | cytosol | 60.06 | 58.69 |
| KRH09280 | Soybean | plastid | 41.11 | 41.72 |
| KRH09281 | Soybean | plastid | 39.94 | 40.53 |
| KRH38783 | Soybean | plastid | 39.65 | 40.36 |
| KRH09282 | Soybean | extracellular | 35.86 | 37.16 |
| KRH38784 | Soybean | plastid | 38.48 | 36.57 |
| KRH20616 | Soybean | cytosol | 26.24 | 32.97 |
| KRH56173 | Soybean | cytosol | 30.03 | 31.31 |
| KRG96320 | Soybean | cytosol | 29.15 | 30.86 |
| KRH68056 | Soybean | cytosol | 29.15 | 30.86 |
| KRH56206 | Soybean | cytosol | 30.32 | 30.77 |
| KRH25344 | Soybean | peroxisome | 26.82 | 29.97 |
| KRH38655 | Soybean | cytosol | 28.28 | 29.94 |
| KRG91414 | Soybean | cytosol | 28.57 | 29.79 |
| KRH01780 | Soybean | cytosol | 29.45 | 29.71 |
| KRH32935 | Soybean | cytosol | 28.57 | 29.52 |
| KRG91413 | Soybean | endoplasmic reticulum | 28.86 | 29.38 |
| KRG90787 | Soybean | cytosol, mitochondrion | 30.03 | 29.26 |
| KRH09175 | Soybean | cytosol, plastid | 26.82 | 28.93 |
| KRH71756 | Soybean | cytosol | 27.99 | 28.92 |
| KRH05152 | Soybean | cytosol | 25.95 | 28.8 |
| KRH62746 | Soybean | cytosol | 26.24 | 28.75 |
| KRH46912 | Soybean | cytosol | 29.74 | 28.18 |
| KRH35975 | Soybean | cytosol | 25.95 | 28.16 |
| KRH48319 | Soybean | nucleus | 27.11 | 27.84 |
| KRH65207 | Soybean | cytosol | 25.66 | 27.59 |
| KRH48318 | Soybean | cytosol | 25.66 | 27.59 |
| KRH38654 | Soybean | cytosol | 22.16 | 26.12 |
| KRH09176 | Soybean | endoplasmic reticulum | 18.95 | 25.49 |
| KRH38658 | Soybean | extracellular | 8.16 | 20.0 |
Protein Annotations
| EntrezGene:100812133 | MapMan:11.6.2.1 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_3 | EMBL:ACUP02006091 |
| EnsemblPlantsGene:GLYMA_10G022900 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005975 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009056 |
| GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009939 |
| GO:GO:0009987 | GO:GO:0010325 | GO:GO:0010331 | GO:GO:0016787 | GO:GO:0048444 | UniProt:I1L7Z8 |
| InterPro:IPR029058 | EnsemblPlants:KRH31953 | ProteinID:KRH31953 | ProteinID:KRH31953.1 | InterPro:Lipase_GDXG_HIS_AS | InterPro:Lipase_GDXG_put_SER_AS |
| PFAM:PF07859 | ScanProsite:PS01173 | ScanProsite:PS01174 | PANTHER:PTHR23024 | PANTHER:PTHR23024:SF98 | MEROPS:S09.A10 |
| SUPFAM:SSF53474 | UniParc:UPI000233D7E7 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:1996701..1999491
Molecular Weight (calculated)
38988.4 Da
IEP (calculated)
6.989
GRAVY (calculated)
-0.289
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MTESNNEVNL SESKSVVPLN TWVLISNFKL AYNLLRRADG TFNRELAEFL DRKVPANTIP VDGVFSFDHV ERSTGLFNRV YQVAPENMGR FIELEKPLST
101: TKIVPVIIFF HGGSFSHSSA NSAIYDIFCR RLVSNCKAVV VSVNYRRSPE YRYPCAYDDG WSALNWVKSR TWLQSGKDSK VHVYLAGDSS GGNIAHHVAV
201: RAAEEDIEVL GNILLHPLFG GEKRTESEMK LDGKYFVRLQ DRDWYWRAFL PEGADRDHPA CNPFGPKGKN LQGLKLPKSL VCVAGLDLLQ DWQLEYVEGL
301: KNCGQDVKLL YLKEATIGFY FLPNNDHFYT LMEEIKNFVN PNC
101: TKIVPVIIFF HGGSFSHSSA NSAIYDIFCR RLVSNCKAVV VSVNYRRSPE YRYPCAYDDG WSALNWVKSR TWLQSGKDSK VHVYLAGDSS GGNIAHHVAV
201: RAAEEDIEVL GNILLHPLFG GEKRTESEMK LDGKYFVRLQ DRDWYWRAFL PEGADRDHPA CNPFGPKGKN LQGLKLPKSL VCVAGLDLLQ DWQLEYVEGL
301: KNCGQDVKLL YLKEATIGFY FLPNNDHFYT LMEEIKNFVN PNC
001: MAGGNEVNLN ECKRIVPLNT WVLISNFKLA YKVLRRPDGS FNRDLAEFLD RKVPANSFPL DGVFSFDHVD STTNLLTRIY QPASLLHQTR HGTLELTKPL
101: STTEIVPVLI FFHGGSFTHS SANSAIYDTF CRRLVTICGV VVVSVDYRRS PEHRYPCAYD DGWNALNWVK SRVWLQSGKD SNVYVYLAGD SSGGNIAHNV
201: AVRATNEGVK VLGNILLHPM FGGQERTQSE KTLDGKYFVT IQDRDWYWRA YLPEGEDRDH PACNPFGPRG QSLKGVNFPK SLVVVAGLDL VQDWQLAYVD
301: GLKKTGLEVN LLYLKQATIG FYFLPNNDHF HCLMEELNKF VHSIEDSQSK SSPVLLTP
101: STTEIVPVLI FFHGGSFTHS SANSAIYDTF CRRLVTICGV VVVSVDYRRS PEHRYPCAYD DGWNALNWVK SRVWLQSGKD SNVYVYLAGD SSGGNIAHNV
201: AVRATNEGVK VLGNILLHPM FGGQERTQSE KTLDGKYFVT IQDRDWYWRA YLPEGEDRDH PACNPFGPRG QSLKGVNFPK SLVVVAGLDL VQDWQLAYVD
301: GLKKTGLEVN LLYLKQATIG FYFLPNNDHF HCLMEELNKF VHSIEDSQSK SSPVLLTP
Arabidopsis Description
GID1BGibberellin receptor GID1B [Source:UniProtKB/Swiss-Prot;Acc:Q9LYC1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.