Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH71503 | Soybean | cytosol | 80.92 | 81.87 |
| KRH31953 | Soybean | cytosol | 79.48 | 80.17 |
| VIT_07s0104g00930.t01 | Wine grape | cytosol | 78.61 | 79.07 |
| Solyc06g008870.2.1 | Tomato | cytosol | 74.86 | 75.07 |
| PGSC0003DMT400056562 | Potato | cytosol | 74.57 | 74.78 |
| PGSC0003DMT400009831 | Potato | cytosol | 73.99 | 74.2 |
| KRH33997 | Soybean | cytosol | 73.12 | 73.55 |
| Solyc09g074270.2.1 | Tomato | cytosol | 72.54 | 72.75 |
| KRG92803 | Soybean | cytosol | 71.68 | 72.09 |
| CDY63333 | Canola | cytosol | 72.83 | 70.39 |
| CDY67478 | Canola | cytosol | 72.83 | 70.39 |
| AT3G63010.1 | Thale cress | cytosol | 72.25 | 69.83 |
| Bra007722.1-P | Field mustard | cytosol | 71.97 | 69.55 |
| Bra003520.1-P | Field mustard | cytosol | 71.68 | 69.27 |
| CDX67913 | Canola | cytosol | 71.68 | 69.27 |
| Bra040420.1-P | Field mustard | cytosol | 71.68 | 68.89 |
| CDX89165 | Canola | cytosol | 71.68 | 68.89 |
| CDY70667 | Canola | cytosol | 71.1 | 68.72 |
| CDX93945 | Canola | extracellular, golgi | 69.36 | 67.42 |
| GSMUA_Achr3P24930_001 | Banana | cytosol | 57.51 | 65.03 |
| GSMUA_Achr5P27430_001 | Banana | cytosol | 57.23 | 64.29 |
| GSMUA_Achr8P05910_001 | Banana | cytosol | 56.65 | 64.26 |
| GSMUA_Achr6P16090_001 | Banana | cytosol | 56.65 | 63.84 |
| GSMUA_Achr10P... | Banana | cytosol | 56.36 | 62.9 |
| Os05t0407500-01 | Rice | cytosol, nucleus | 60.69 | 59.32 |
| TraesCS1B01G265900.1 | Wheat | cytosol | 60.12 | 58.59 |
| TraesCS1A01G255100.1 | Wheat | cytosol | 60.12 | 58.59 |
| GSMUA_Achr5P27450_001 | Banana | mitochondrion | 57.23 | 58.58 |
| TraesCS1D01G254500.1 | Wheat | cytosol | 59.83 | 58.47 |
| HORVU1Hr1G060810.1 | Barley | cytosol | 59.54 | 58.19 |
| Zm00001d010308_P001 | Maize | cytosol, plastid | 58.38 | 57.71 |
| Zm00001d038165_P003 | Maize | cytosol | 57.8 | 56.98 |
| KXG21982 | Sorghum | cytosol | 58.09 | 56.62 |
| KRH09280 | Soybean | plastid | 40.17 | 41.12 |
| KRH38783 | Soybean | plastid | 39.02 | 40.06 |
| KRH09281 | Soybean | plastid | 37.86 | 38.76 |
| KRH09282 | Soybean | extracellular | 34.97 | 36.56 |
| KRH38784 | Soybean | plastid | 36.99 | 35.46 |
| KRH38655 | Soybean | cytosol | 29.77 | 31.79 |
| KRH20616 | Soybean | cytosol | 24.86 | 31.5 |
| KRH32935 | Soybean | cytosol | 30.06 | 31.33 |
| KRH56173 | Soybean | cytosol | 29.48 | 31.0 |
| KRG96320 | Soybean | cytosol | 28.9 | 30.86 |
| KRH68056 | Soybean | cytosol | 28.9 | 30.86 |
| KRG91414 | Soybean | cytosol | 28.9 | 30.4 |
| KRH56206 | Soybean | cytosol | 29.19 | 29.88 |
| KRH71756 | Soybean | cytosol | 28.61 | 29.82 |
| KRH25344 | Soybean | peroxisome | 26.3 | 29.64 |
| KRH05152 | Soybean | cytosol | 26.3 | 29.45 |
| KRH09175 | Soybean | cytosol, plastid | 26.59 | 28.93 |
| KRH01780 | Soybean | cytosol | 28.32 | 28.82 |
| KRG90787 | Soybean | cytosol, mitochondrion | 28.9 | 28.41 |
| KRG91413 | Soybean | endoplasmic reticulum | 27.46 | 28.19 |
| KRH35975 | Soybean | cytosol | 25.43 | 27.85 |
| KRH62746 | Soybean | cytosol | 25.14 | 27.8 |
| KRH46912 | Soybean | cytosol | 28.61 | 27.35 |
| KRH48319 | Soybean | nucleus | 26.3 | 27.25 |
| KRH38654 | Soybean | cytosol | 21.97 | 26.12 |
| KRH48318 | Soybean | cytosol | 23.99 | 26.02 |
| KRH09176 | Soybean | endoplasmic reticulum | 19.08 | 25.88 |
| KRH65207 | Soybean | cytosol | 23.41 | 25.39 |
| KRH38658 | Soybean | extracellular | 8.38 | 20.71 |
Protein Annotations
| EntrezGene:100788435 | MapMan:11.6.2.1 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_3 | EMBL:ACUP02002035 |
| EnsemblPlantsGene:GLYMA_03G148300 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005975 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009056 |
| GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009939 |
| GO:GO:0009987 | GO:GO:0010325 | GO:GO:0010331 | GO:GO:0016787 | GO:GO:0048444 | UniProt:I1JNP5 |
| InterPro:IPR029058 | EnsemblPlants:KRH67123 | ProteinID:KRH67123 | ProteinID:KRH67123.1 | InterPro:Lipase_GDXG_HIS_AS | InterPro:Lipase_GDXG_put_SER_AS |
| PFAM:PF07859 | ScanProsite:PS01173 | ScanProsite:PS01174 | PANTHER:PTHR23024 | PANTHER:PTHR23024:SF98 | MEROPS:S09.A15 |
| SUPFAM:SSF53474 | UniParc:UPI00023C1AA6 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:36396632..36399188
Molecular Weight (calculated)
39393.8 Da
IEP (calculated)
7.544
GRAVY (calculated)
-0.305
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSNQVNLN ESRSVVPLNT WVLISNFKLS YKLLRRDDGT FNRELAEYLD RKVPANAIPV EGVFSIDHVD RNAGLFYRVY LPTSGNEAQW GIRDLEKPLS
101: TTEIVPVIVF FHGGSFSHSS ANSHIYDTFC RRLVRICKAA VVSVNYRRSP EHRYPCAYDD GWAALRWVKS RAWLQSGREA KVHVYLAGDS SGGNIVHHVA
201: VRAAEEEIEV LGNILLHPLF GGEKRTESEL RLDGKYFVRL KDRDWYWRAF LPEGENRDHP ACNPFGPRGR SIEGLKFPKS LVCVAGLDLL QDWQLAYAKG
301: LEDCGQQVKL LFLKEATIGF YFLPNNDHFY CLMKEINNFV NSDSDC
101: TTEIVPVIVF FHGGSFSHSS ANSHIYDTFC RRLVRICKAA VVSVNYRRSP EHRYPCAYDD GWAALRWVKS RAWLQSGREA KVHVYLAGDS SGGNIVHHVA
201: VRAAEEEIEV LGNILLHPLF GGEKRTESEL RLDGKYFVRL KDRDWYWRAF LPEGENRDHP ACNPFGPRGR SIEGLKFPKS LVCVAGLDLL QDWQLAYAKG
301: LEDCGQQVKL LFLKEATIGF YFLPNNDHFY CLMKEINNFV NSDSDC
001: MAGGNEVNLN ECKRIVPLNT WVLISNFKLA YKVLRRPDGS FNRDLAEFLD RKVPANSFPL DGVFSFDHVD STTNLLTRIY QPASLLHQTR HGTLELTKPL
101: STTEIVPVLI FFHGGSFTHS SANSAIYDTF CRRLVTICGV VVVSVDYRRS PEHRYPCAYD DGWNALNWVK SRVWLQSGKD SNVYVYLAGD SSGGNIAHNV
201: AVRATNEGVK VLGNILLHPM FGGQERTQSE KTLDGKYFVT IQDRDWYWRA YLPEGEDRDH PACNPFGPRG QSLKGVNFPK SLVVVAGLDL VQDWQLAYVD
301: GLKKTGLEVN LLYLKQATIG FYFLPNNDHF HCLMEELNKF VHSIEDSQSK SSPVLLTP
101: STTEIVPVLI FFHGGSFTHS SANSAIYDTF CRRLVTICGV VVVSVDYRRS PEHRYPCAYD DGWNALNWVK SRVWLQSGKD SNVYVYLAGD SSGGNIAHNV
201: AVRATNEGVK VLGNILLHPM FGGQERTQSE KTLDGKYFVT IQDRDWYWRA YLPEGEDRDH PACNPFGPRG QSLKGVNFPK SLVVVAGLDL VQDWQLAYVD
301: GLKKTGLEVN LLYLKQATIG FYFLPNNDHF HCLMEELNKF VHSIEDSQSK SSPVLLTP
Arabidopsis Description
GID1BGibberellin receptor GID1B [Source:UniProtKB/Swiss-Prot;Acc:Q9LYC1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.