Factsheet for Solyc09g074270.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc04g078390.1.1
Solyc11g011260.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63010.1	Solyc11g011260.1.1	AT1G66350.1	16709201
AT3G63010.1	Solyc11g011260.1.1	AT1G66350.1	19500306
AT3G63010.1	Solyc11g011260.1.1	AT3G03450.1	16709201
AT3G63010.1	Solyc11g011260.1.1	AT3G03450.1	19500306
AT3G63010.1	Solyc04g078390.1.1	AT4G24210.1	16709201
AT3G63010.1	Solyc04g078390.1.1	AT4G24210.1	19500306

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009831	Potato	cytosol	95.07	95.07
Solyc06g008870.2.1	Tomato	cytosol	86.38	86.38
VIT_07s0104g00930.t01	Wine grape	cytosol	81.16	81.4
KRH71503	Soybean	cytosol	77.1	77.78
KRH31953	Soybean	cytosol	76.52	76.97
CDY67478	Canola	cytosol	76.52	73.74
CDY63333	Canola	cytosol	75.94	73.18
AT3G63010.1	Thale cress	cytosol	75.94	73.18
KRH67123	Soybean	cytosol	72.75	72.54
CDX89165	Canola	cytosol	75.36	72.22
CDX67913	Canola	cytosol	74.78	72.07
Bra007722.1-P	Field mustard	cytosol	74.49	71.79
Bra003520.1-P	Field mustard	cytosol	74.49	71.79
Bra040420.1-P	Field mustard	cytosol	74.78	71.67
CDX93945	Canola	extracellular, golgi	73.91	71.63
CDY70667	Canola	cytosol	74.2	71.51
Solyc01g098390.2.1	Tomato	cytosol	69.86	69.05
GSMUA_Achr3P24930_001	Banana	cytosol	59.42	66.99
GSMUA_Achr8P05910_001	Banana	cytosol	59.13	66.89
GSMUA_Achr10P...	Banana	cytosol	59.71	66.45
GSMUA_Achr5P27430_001	Banana	cytosol	58.84	65.91
GSMUA_Achr6P16090_001	Banana	cytosol	57.68	64.82
GSMUA_Achr5P27450_001	Banana	mitochondrion	59.13	60.35
Os05t0407500-01	Rice	cytosol, nucleus	59.71	58.19
Zm00001d010308_P001	Maize	cytosol, plastid	58.84	58.0
Zm00001d038165_P003	Maize	cytosol	58.55	57.55
KXG21982	Sorghum	cytosol	59.13	57.46
TraesCS1B01G265900.1	Wheat	cytosol	58.84	57.18
HORVU1Hr1G060810.1	Barley	cytosol	58.55	57.06
TraesCS1A01G255100.1	Wheat	cytosol	58.55	56.9
TraesCS1D01G254500.1	Wheat	cytosol	58.26	56.78
Solyc10g054780.1.1	Tomato	nucleus	37.39	37.28
Solyc11g071720.1.1	Tomato	cytosol, extracellular	29.86	31.99
Solyc11g045460.1.1	Tomato	cytosol	21.74	30.36
Solyc02g069800.1.1	Tomato	extracellular	28.99	29.85
Solyc05g009610.1.1	Tomato	cytosol	29.57	29.57
Solyc02g085800.1.1	Tomato	cytosol	28.12	28.28
Solyc08g060930.2.1	Tomato	cytosol	12.46	27.04
Solyc01g091410.2.1	Tomato	cytosol, unclear	24.64	26.56
Solyc07g040890.1.1	Tomato	cytosol, extracellular	25.51	26.51
Solyc06g035520.2.1	Tomato	extracellular	24.64	26.07
Solyc01g094010.2.1	Tomato	cytosol	24.06	24.48
Solyc01g098140.2.1	Tomato	cytosol	27.25	14.51

Protein Annotations

MapMan:11.6.2.1	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	GO:GO:0000003	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005975	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0008289	GO:GO:0009056	GO:GO:0009058	GO:GO:0009653	GO:GO:0009719
GO:GO:0009791	GO:GO:0009908	GO:GO:0009939	GO:GO:0009987	GO:GO:0010325	GO:GO:0010331
GO:GO:0016787	GO:GO:0048444	InterPro:IPR029058	UniProt:K4CV04	InterPro:Lipase_GDXG_HIS_AS	InterPro:Lipase_GDXG_put_SER_AS
PFAM:PF07859	ScanProsite:PS01173	ScanProsite:PS01174	PANTHER:PTHR23024	PANTHER:PTHR23024:SF98	SUPFAM:SSF53474
EnsemblPlantsGene:Solyc09g074270.2	EnsemblPlants:Solyc09g074270.2.1	UniParc:UPI000276B381	:	:	:

Description

No Description!

Coordinates

chr9:-:66057802..66059629

Molecular Weight (calculated)

39048.4 Da

IEP (calculated)

7.084

GRAVY (calculated)

-0.270

Length

345 amino acids

Sequence
(BLAST)

001: MVDTKEINTN ESKRVVPLNT WILISNFKLA YNMLRRSDGT FNRDLAEFLE RKVGANSIPV DGVYSFDVVD RCTSLLNRVY KPAPKNECDW GKIDLDTPLS
101: TSEIVPVIIF FHGGSFTHSS ANSAIYDTFC RRLVSICKAV VVSVNYRRSP ENRYPCAYDD GWAALQWVKS RAWLQSGEDL KVHVYMSGDS SGGNIAHHVA
201: VQAAESGVEV LGNILLHPMF GGQNRTESES RLDGKYFVTV QDRDWYWRAY LPVGEDRDHP ACNIFGPRGK TLQGLKFPKS LVVVAGLDLV QDWQLNYVEG
301: LKKSGHEVNL LYLKQATIGF YFLPNNDHFR CLMEEITSFI HPNHS

Best Arabidopsis Sequence Match ( AT3G63010.1 )
(BLAST)

001: MAGGNEVNLN ECKRIVPLNT WVLISNFKLA YKVLRRPDGS FNRDLAEFLD RKVPANSFPL DGVFSFDHVD STTNLLTRIY QPASLLHQTR HGTLELTKPL
101: STTEIVPVLI FFHGGSFTHS SANSAIYDTF CRRLVTICGV VVVSVDYRRS PEHRYPCAYD DGWNALNWVK SRVWLQSGKD SNVYVYLAGD SSGGNIAHNV
201: AVRATNEGVK VLGNILLHPM FGGQERTQSE KTLDGKYFVT IQDRDWYWRA YLPEGEDRDH PACNPFGPRG QSLKGVNFPK SLVVVAGLDL VQDWQLAYVD
301: GLKKTGLEVN LLYLKQATIG FYFLPNNDHF HCLMEELNKF VHSIEDSQSK SSPVLLTP

Arabidopsis Description

GID1BGibberellin receptor GID1B [Source:UniProtKB/Swiss-Prot;Acc:Q9LYC1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.