Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80665 | Canola | cytosol | 92.44 | 92.44 |
| CDY16687 | Canola | cytosol | 92.44 | 92.17 |
| Bra009970.1-P | Field mustard | cytosol | 92.44 | 92.17 |
| AT3G05120.1 | Thale cress | cytosol | 85.76 | 85.51 |
| KRH33997 | Soybean | cytosol | 78.78 | 78.78 |
| KRG92803 | Soybean | cytosol | 78.49 | 78.49 |
| PGSC0003DMT400073501 | Potato | cytosol | 77.91 | 77.01 |
| Solyc01g098390.2.1 | Tomato | cytosol | 77.91 | 76.79 |
| VIT_14s0030g00440.t01 | Wine grape | cytosol | 81.69 | 74.54 |
| GSMUA_Achr3P24930_001 | Banana | cytosol | 64.53 | 72.55 |
| GSMUA_Achr8P05910_001 | Banana | cytosol | 62.79 | 70.82 |
| GSMUA_Achr5P27430_001 | Banana | cytosol | 63.37 | 70.78 |
| GSMUA_Achr10P... | Banana | cytosol | 62.79 | 69.68 |
| GSMUA_Achr6P16090_001 | Banana | cytosol | 61.34 | 68.73 |
| AT3G63010.1 | Thale cress | cytosol | 70.64 | 67.88 |
| GSMUA_Achr5P27450_001 | Banana | mitochondrion | 63.95 | 65.09 |
| Zm00001d010308_P001 | Maize | cytosol, plastid | 63.37 | 62.29 |
| TraesCS1A01G255100.1 | Wheat | cytosol | 63.95 | 61.97 |
| KXG21982 | Sorghum | cytosol | 63.95 | 61.97 |
| Os05t0407500-01 | Rice | cytosol, nucleus | 63.66 | 61.86 |
| Zm00001d038165_P003 | Maize | cytosol | 63.08 | 61.82 |
| TraesCS1B01G265900.1 | Wheat | cytosol | 63.37 | 61.41 |
| HORVU1Hr1G060810.1 | Barley | cytosol | 62.79 | 61.02 |
| TraesCS1D01G254500.1 | Wheat | cytosol | 62.79 | 61.02 |
| AT5G23530.1 | Thale cress | cytosol | 37.5 | 38.51 |
| AT5G06570.3 | Thale cress | cytosol | 30.81 | 30.81 |
| AT1G68620.1 | Thale cress | cytosol | 29.65 | 30.36 |
| AT5G16080.1 | Thale cress | cytosol | 28.49 | 28.49 |
| AT5G62180.1 | Thale cress | cytosol | 27.03 | 28.44 |
| AT2G45610.1 | Thale cress | cytosol | 25.87 | 27.47 |
| AT2G45600.1 | Thale cress | cytosol | 26.16 | 27.36 |
Protein Annotations
| MapMan:11.6.2.1 | Gene3D:3.40.50.1820 | EntrezGene:832790 | UniProt:A0A178UKX0 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_3 |
| EMBL:AC007123 | ProteinID:AED93672.1 | ArrayExpress:AT5G27320 | EnsemblPlantsGene:AT5G27320 | RefSeq:AT5G27320 | TAIR:AT5G27320 |
| RefSeq:AT5G27320-TAIR-G | EnsemblPlants:AT5G27320.1 | TAIR:AT5G27320.1 | Symbol:ATGID1C | EMBL:AY054653 | EMBL:AY128729 |
| Unigene:At.22176 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009056 |
| GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009739 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009939 |
| GO:GO:0009987 | GO:GO:0010331 | GO:GO:0010476 | GO:GO:0010629 | GO:GO:0016787 | GO:GO:0048444 |
| GO:GO:0048530 | InterPro:IPR029058 | InterPro:Lipase_GDXG_HIS_AS | InterPro:Lipase_GDXG_put_SER_AS | RefSeq:NP_198084.1 | ProteinID:OAO93341.1 |
| PFAM:PF07859 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006340 |
| PO:PO:0007022 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 | PO:PO:0020003 |
| PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01173 |
| ScanProsite:PS01174 | PANTHER:PTHR23024 | PANTHER:PTHR23024:SF227 | UniProt:Q940G6 | MEROPS:S09.A10 | SUPFAM:SSF53474 |
| UniParc:UPI00000A6BC5 | : | : | : | : | : |
Description
GID1CGID1C [Source:UniProtKB/TrEMBL;Acc:A0A178UKX0]
Coordinates
chr5:+:9628990..9631291
Molecular Weight (calculated)
38427.7 Da
IEP (calculated)
7.165
GRAVY (calculated)
-0.165
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSEEVNLI ESKTVVPLNT WVLISNFKLA YNLLRRPDGT FNRHLAEFLD RKVPANANPV NGVFSFDVII DRQTNLLSRV YRPADAGTSP SITDLQNPVD
101: GEIVPVIVFF HGGSFAHSSA NSAIYDTLCR RLVGLCGAVV VSVNYRRAPE NRYPCAYDDG WAVLKWVNSS SWLRSKKDSK VRIFLAGDSS GGNIVHNVAV
201: RAVESRIDVL GNILLNPMFG GTERTESEKR LDGKYFVTVR DRDWYWRAFL PEGEDREHPA CSPFGPRSKS LEGLSFPKSL VVVAGLDLIQ DWQLKYAEGL
301: KKAGQEVKLL YLEQATIGFY LLPNNNHFHT VMDEIAAFVN AECQ
101: GEIVPVIVFF HGGSFAHSSA NSAIYDTLCR RLVGLCGAVV VSVNYRRAPE NRYPCAYDDG WAVLKWVNSS SWLRSKKDSK VRIFLAGDSS GGNIVHNVAV
201: RAVESRIDVL GNILLNPMFG GTERTESEKR LDGKYFVTVR DRDWYWRAFL PEGEDREHPA CSPFGPRSKS LEGLSFPKSL VVVAGLDLIQ DWQLKYAEGL
301: KKAGQEVKLL YLEQATIGFY LLPNNNHFHT VMDEIAAFVN AECQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.