Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G224900.1 | Wheat | cytosol | 93.36 | 81.92 |
| TraesCS4D01G088300.1 | Wheat | cytosol | 93.69 | 81.74 |
| TraesCS4B01G091200.1 | Wheat | cytosol | 93.36 | 81.45 |
| HORVU4Hr1G015560.1 | Barley | plastid | 90.03 | 68.96 |
| Zm00001d007257_P001 | Maize | plastid | 75.08 | 65.32 |
| EES08278 | Sorghum | plastid | 75.42 | 64.86 |
| Os11t0239500-01 | Rice | plasma membrane | 73.42 | 60.22 |
| TraesCS4A01G225700.1 | Wheat | mitochondrion | 63.46 | 56.01 |
| VIT_07s0130g00320.t01 | Wine grape | plastid | 45.85 | 41.19 |
| VIT_07s0130g00340.t01 | Wine grape | plastid | 45.18 | 40.6 |
| TraesCS2A01G143300.1 | Wheat | plastid | 45.51 | 39.71 |
| KRH09281 | Soybean | plastid | 43.52 | 38.76 |
| CDX87169 | Canola | cytosol | 42.19 | 37.91 |
| VIT_18s0089g00370.t01 | Wine grape | cytosol | 41.53 | 37.88 |
| KRH09280 | Soybean | plastid | 42.52 | 37.87 |
| TraesCS2A01G143000.1 | Wheat | cytosol | 42.52 | 37.87 |
| TraesCS2A01G143600.1 | Wheat | cytosol | 42.19 | 37.8 |
| TraesCS2A01G143500.1 | Wheat | cytosol | 44.85 | 37.71 |
| KRH38783 | Soybean | plastid | 41.86 | 37.39 |
| Solyc10g054780.1.1 | Tomato | nucleus | 42.86 | 37.28 |
| TraesCS2A01G173400.1 | Wheat | plastid | 43.19 | 37.25 |
| TraesCS2A01G143100.1 | Wheat | cytosol | 43.19 | 37.25 |
| TraesCS2A01G143200.1 | Wheat | golgi | 43.52 | 37.11 |
| CDY16855 | Canola | cytosol | 41.2 | 37.01 |
| Bra026494.1-P | Field mustard | cytosol | 41.2 | 37.01 |
| CDX80370 | Canola | cytosol | 40.53 | 36.42 |
| CDX88032 | Canola | cytosol | 40.53 | 36.42 |
| Bra009691.1-P | Field mustard | cytosol | 39.87 | 35.82 |
| AT5G23530.1 | Thale cress | cytosol | 39.87 | 35.82 |
| KRH09282 | Soybean | extracellular | 39.2 | 35.65 |
| VIT_18s0089g00390.t01 | Wine grape | endoplasmic reticulum, mitochondrion, plastid | 36.88 | 34.69 |
| VIT_18s0089g00380.t01 | Wine grape | mitochondrion | 37.21 | 34.04 |
| VIT_18s0089g00400.t01 | Wine grape | mitochondrion | 37.87 | 33.63 |
| KRH38784 | Soybean | plastid | 38.21 | 31.86 |
| TraesCS3A01G307200.1 | Wheat | cytosol | 31.89 | 29.36 |
| TraesCS7A01G154600.1 | Wheat | nucleus | 34.55 | 29.13 |
| TraesCS3A01G307000.1 | Wheat | cytosol | 30.56 | 28.13 |
| TraesCS1A01G255100.1 | Wheat | cytosol | 32.56 | 27.61 |
| TraesCS6A01G389700.1 | Wheat | plastid | 31.56 | 26.99 |
| TraesCS3A01G307100.1 | Wheat | cytosol | 29.9 | 26.95 |
| TraesCS5A01G427400.1 | Wheat | cytosol | 29.9 | 26.95 |
| TraesCS7A01G271100.1 | Wheat | cytosol, plastid | 31.56 | 26.91 |
| TraesCS3A01G131200.1 | Wheat | cytosol | 29.57 | 26.25 |
| TraesCS4A01G085300.1 | Wheat | mitochondrion | 30.23 | 25.28 |
| TraesCS7A01G422300.1 | Wheat | cytosol | 30.56 | 25.07 |
| TraesCS4A01G023600.1 | Wheat | cytosol, plastid | 27.91 | 25.0 |
| TraesCS4A01G081600.1 | Wheat | peroxisome | 27.57 | 24.92 |
| TraesCS6A01G313200.1 | Wheat | cytosol | 28.57 | 24.64 |
| TraesCS1A01G257500.1 | Wheat | cytosol, plastid | 26.91 | 22.75 |
| TraesCS1A01G257000.1 | Wheat | cytosol | 25.91 | 22.03 |
| TraesCS5A01G070900.1 | Wheat | cytosol, peroxisome, plasma membrane | 25.58 | 21.63 |
| TraesCS2A01G247100.1 | Wheat | cytosol | 19.27 | 19.27 |
| TraesCS7A01G463000.1 | Wheat | mitochondrion, plastid | 24.92 | 18.38 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G225000.1 | EnsemblPlantsGene:TraesCS4A01G225000 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016787 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_3 | InterPro:IPR029058 | PANTHER:PTHR23024 |
| PANTHER:PTHR23024:SF159 | PFAM:PF07859 | SEG:seg | SUPFAM:SSF53474 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr4A:+:532897177..532898552
Molecular Weight (calculated)
33127.2 Da
IEP (calculated)
6.629
GRAVY (calculated)
-0.246
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEPPPASR PKPPMSRIMR LSLRAVDYVA DATRRADGTV NRRVLSLLDP RVPAFSSPCR GVASRDVVVD PTLRVRARLF HPARPAGDAK GAPLPVIVFF
101: HGGGFAFLSA ASLAYDAACR RIARYASAAV LSVDYRRAPE HRFPAPYDDG LAALRFLDDP SNHQADVPLQ TSRWFLAALR FLDDPSNHQA DARTDWMWRA
201: FLPDGADRTH EAACFTSPGA AAGVDSPAFP PVLLVIGGYD PLQDWQRRYC EMLKDSGKDV RVLEYPDGIH AFFLFPGFDD ARNLMTRIAE FVGESDDGGS
301: E
101: HGGGFAFLSA ASLAYDAACR RIARYASAAV LSVDYRRAPE HRFPAPYDDG LAALRFLDDP SNHQADVPLQ TSRWFLAALR FLDDPSNHQA DARTDWMWRA
201: FLPDGADRTH EAACFTSPGA AAGVDSPAFP PVLLVIGGYD PLQDWQRRYC EMLKDSGKDV RVLEYPDGIH AFFLFPGFDD ARNLMTRIAE FVGESDDGGS
301: E
001: MAASDEVNLI ESRTVVPLNT WVLISNFKVA YNILRRPDGT FNRHLAEYLD RKVTANANPV DGVFSFDVLI DRRINLLSRV YRPAYADQEQ PPSILDLEKP
101: VDGDIVPVIL FFHGGSFAHS SANSAIYDTL CRRLVGLCKC VVVSVNYRRA PENPYPCAYD DGWIALNWVN SRSWLKSKKD SKVHIFLAGD SSGGNIAHNV
201: ALRAGESGID VLGNILLNPM FGGNERTESE KSLDGKYFVT VRDRDWYWKA FLPEGEDREH PACNPFSPRG KSLEGVSFPK SLVVVAGLDL IRDWQLAYAE
301: GLKKAGQEVK LMHLEKATVG FYLLPNNNHF HNVMDEISAF VNAEC
101: VDGDIVPVIL FFHGGSFAHS SANSAIYDTL CRRLVGLCKC VVVSVNYRRA PENPYPCAYD DGWIALNWVN SRSWLKSKKD SKVHIFLAGD SSGGNIAHNV
201: ALRAGESGID VLGNILLNPM FGGNERTESE KSLDGKYFVT VRDRDWYWKA FLPEGEDREH PACNPFSPRG KSLEGVSFPK SLVVVAGLDL IRDWQLAYAE
301: GLKKAGQEVK LMHLEKATVG FYLLPNNNHF HNVMDEISAF VNAEC
Arabidopsis Description
GID1AGID1A [Source:UniProtKB/TrEMBL;Acc:A0A178VM30]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.