Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G025390.1 | Barley | mitochondrion | 88.99 | 87.71 |
| TraesCS2D01G146600.1 | Wheat | plastid | 90.14 | 79.13 |
| TraesCS2A01G143500.1 | Wheat | cytosol | 76.52 | 73.74 |
| Os07t0643400-01 | Rice | plasma membrane | 70.43 | 68.45 |
| OQU90362 | Sorghum | mitochondrion, plastid | 63.48 | 66.77 |
| Zm00001d022326_P001 | Maize | cytosol | 63.48 | 64.22 |
| TraesCS2A01G143200.1 | Wheat | golgi | 65.22 | 63.74 |
| HORVU2Hr1G025360.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 41.74 | 63.44 |
| TraesCS2A01G143600.1 | Wheat | cytosol | 61.45 | 63.1 |
| TraesCS7A01G154600.1 | Wheat | nucleus | 65.22 | 63.03 |
| TraesCS2A01G143100.1 | Wheat | cytosol | 59.13 | 58.45 |
| TraesCS2A01G143000.1 | Wheat | cytosol | 54.49 | 55.62 |
| Zm00001d022372_P001 | Maize | cytosol | 38.84 | 54.47 |
| TraesCS4A01G225700.1 | Wheat | mitochondrion | 49.86 | 50.44 |
| TraesCS4A01G224900.1 | Wheat | cytosol | 49.28 | 49.56 |
| TraesCS4A01G225000.1 | Wheat | cytosol | 39.71 | 45.51 |
| TraesCS2A01G173400.1 | Wheat | plastid | 44.35 | 43.84 |
| TraesCS3A01G307200.1 | Wheat | cytosol | 34.49 | 36.39 |
| TraesCS6A01G389700.1 | Wheat | plastid | 36.81 | 36.08 |
| TraesCS3A01G307000.1 | Wheat | cytosol | 33.91 | 35.78 |
| TraesCS3A01G307100.1 | Wheat | cytosol | 34.2 | 35.33 |
| TraesCS1A01G255100.1 | Wheat | cytosol | 35.94 | 34.93 |
| TraesCS3A01G131200.1 | Wheat | cytosol | 33.91 | 34.51 |
| TraesCS5A01G427400.1 | Wheat | cytosol | 32.17 | 33.23 |
| TraesCS6A01G313200.1 | Wheat | cytosol | 33.04 | 32.66 |
| TraesCS4A01G023600.1 | Wheat | cytosol, plastid | 31.01 | 31.85 |
| TraesCS7A01G422300.1 | Wheat | cytosol | 33.33 | 31.34 |
| TraesCS4A01G081600.1 | Wheat | peroxisome | 27.54 | 28.53 |
| TraesCS7A01G271100.1 | Wheat | cytosol, plastid | 28.7 | 28.05 |
| TraesCS4A01G085300.1 | Wheat | mitochondrion | 28.99 | 27.78 |
| TraesCS2A01G247100.1 | Wheat | cytosol | 23.77 | 27.24 |
| TraesCS1A01G257000.1 | Wheat | cytosol | 27.83 | 27.12 |
| TraesCS1A01G257500.1 | Wheat | cytosol, plastid | 27.25 | 26.4 |
| TraesCS5A01G070900.1 | Wheat | cytosol, peroxisome, plasma membrane | 26.09 | 25.28 |
| TraesCS7A01G463000.1 | Wheat | mitochondrion, plastid | 28.99 | 24.51 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G143300.1 | EnsemblPlantsGene:TraesCS2A01G143300 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016787 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_3 | InterPro:IPR029058 | InterPro:Lipase_GDXG_HIS_AS |
| PANTHER:PTHR23024 | PANTHER:PTHR23024:SF243 | PFAM:PF07859 | ScanProsite:PS01173 | SEG:seg | SUPFAM:SSF53474 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2A:-:88287180..88288217
Molecular Weight (calculated)
37555.8 Da
IEP (calculated)
7.251
GRAVY (calculated)
-0.125
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAESARPA PPVLPWTVRL QVLALGAFCD LSQRRDGTVN RSLFSLADRQ TSARPRPDAL GVRSVDVVVD PARSLWARVF SPSADNAEAT PLPVLVYFHG
101: GGFALLSAAS APLDAMCRRF CRELGAVVVS VNYRRAPEHR YPAAYDDCAD VLSYLATTGL PADIGVPVDL SRCFLFGDSA GGNIAHHVAH RWTSSAAASS
201: NNPVRLAGII LLQPYFGGEE RTEAELRLEG VGPVVNMRRS DWSWKAFLPE GADRNHPAAH VTGEAGPEPE LPEAFPPAMV VIGGFDPLQD WQRRYPAMLR
301: RKGKAVRVLE FPDAIHGFYM FPKLPDAGKL VKDVKNFMET TTCDH
101: GGFALLSAAS APLDAMCRRF CRELGAVVVS VNYRRAPEHR YPAAYDDCAD VLSYLATTGL PADIGVPVDL SRCFLFGDSA GGNIAHHVAH RWTSSAAASS
201: NNPVRLAGII LLQPYFGGEE RTEAELRLEG VGPVVNMRRS DWSWKAFLPE GADRNHPAAH VTGEAGPEPE LPEAFPPAMV VIGGFDPLQD WQRRYPAMLR
301: RKGKAVRVLE FPDAIHGFYM FPKLPDAGKL VKDVKNFMET TTCDH
001: MAASDEVNLI ESRTVVPLNT WVLISNFKVA YNILRRPDGT FNRHLAEYLD RKVTANANPV DGVFSFDVLI DRRINLLSRV YRPAYADQEQ PPSILDLEKP
101: VDGDIVPVIL FFHGGSFAHS SANSAIYDTL CRRLVGLCKC VVVSVNYRRA PENPYPCAYD DGWIALNWVN SRSWLKSKKD SKVHIFLAGD SSGGNIAHNV
201: ALRAGESGID VLGNILLNPM FGGNERTESE KSLDGKYFVT VRDRDWYWKA FLPEGEDREH PACNPFSPRG KSLEGVSFPK SLVVVAGLDL IRDWQLAYAE
301: GLKKAGQEVK LMHLEKATVG FYLLPNNNHF HNVMDEISAF VNAEC
101: VDGDIVPVIL FFHGGSFAHS SANSAIYDTL CRRLVGLCKC VVVSVNYRRA PENPYPCAYD DGWIALNWVN SRSWLKSKKD SKVHIFLAGD SSGGNIAHNV
201: ALRAGESGID VLGNILLNPM FGGNERTESE KSLDGKYFVT VRDRDWYWKA FLPEGEDREH PACNPFSPRG KSLEGVSFPK SLVVVAGLDL IRDWQLAYAE
301: GLKKAGQEVK LMHLEKATVG FYLLPNNNHF HNVMDEISAF VNAEC
Arabidopsis Description
GID1AGID1A [Source:UniProtKB/TrEMBL;Acc:A0A178VM30]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.