Factsheet for TraesCS2D01G146600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G143300.1	Wheat	plastid	79.13	90.14
HORVU2Hr1G025390.1	Barley	mitochondrion	78.63	88.29
TraesCS2D01G147100.1	Wheat	cytosol	67.94	76.07
Os07t0643400-01	Rice	plasma membrane	61.58	68.17
OQU90362	Sorghum	mitochondrion, plastid	54.96	65.85
TraesCS2D01G147200.1	Wheat	cytosol	54.96	64.29
HORVU2Hr1G025360.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.9	63.88
Zm00001d022326_P001	Maize	cytosol	55.22	63.64
TraesCS2D01G146500.1	Wheat	golgi	56.74	62.99
TraesCS2D01G146400.1	Wheat	cytosol	52.16	58.57
TraesCS2D01G146300.1	Wheat	cytosol	52.42	56.44
Zm00001d022372_P001	Maize	cytosol	33.33	53.25
TraesCS4D01G087700.1	Wheat	mitochondrion	43.0	49.56
TraesCS4D01G088300.1	Wheat	cytosol	41.73	47.54
TraesCS2D01G180600.1	Wheat	plastid	38.42	43.39
TraesCS5D01G435500.1	Wheat	cytosol	29.52	37.3
TraesCS3D01G132000.1	Wheat	cytosol	26.97	36.18
TraesCS3D01G131900.1	Wheat	cytosol	30.53	36.04
TraesCS5D01G435400.1	Wheat	cytosol	30.53	35.93
TraesCS1D01G254500.1	Wheat	cytosol	32.32	35.88
TraesCS7D01G414500.1	Wheat	cytosol	29.26	34.23
TraesCS3D01G131800.1	Wheat	cytosol	30.03	34.2
TraesCS6D01G277700.1	Wheat	plastid	31.3	33.7
TraesCS6D01G292900.1	Wheat	cytosol	29.77	33.52
TraesCS6D01G310200.1	Wheat	cytosol	28.24	32.94
TraesCS2D01G249700.1	Wheat	cytosol	29.26	32.86
TraesCS7D01G450900.1	Wheat	cytosol	27.99	32.64
TraesCS4D01G278400.1	Wheat	cytosol	27.74	32.44
TraesCS2D01G249500.1	Wheat	mitochondrion, plastid	29.77	31.71
TraesCS3D01G516500.1	Wheat	cytosol	26.72	31.34
TraesCS7D01G271500.1	Wheat	cytosol	25.95	28.9
TraesCS4D01G219100.1	Wheat	mitochondrion	25.19	27.58
TraesCS1D01G256400.1	Wheat	cytosol	24.68	27.09
TraesCS4D01G222700.1	Wheat	peroxisome	22.65	26.89
TraesCS1D01G256800.1	Wheat	cytosol	23.41	25.84
TraesCS5D01G082900.1	Wheat	cytosol, peroxisome, plasma membrane	21.88	24.16

Protein Annotations

EnsemblPlants:TraesCS2D01G146600.1	EnsemblPlantsGene:TraesCS2D01G146600	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	PANTHER:PTHR23024
PANTHER:PTHR23024:SF243	PFAM:PF07859	SEG:seg	SUPFAM:SSF53474	MapMan:35.1	:

Description

No Description!

Coordinates

chr2D:-:87812787..87816752

Molecular Weight (calculated)

42635.2 Da

IEP (calculated)

8.564

GRAVY (calculated)

-0.103

Length

393 amino acids

Sequence
(BLAST)

001: MIIFKPSSAI YIVSVAIGSV ADCSHPPVRK YLSEAARRRR PSRRAKKLMA GAESARPAPP VLPWTVRLQV LALGAACDLS QRRDGTVNRF LFSLVDRQTP
101: ARPRPDALGV RSADVVVDAA RNLWARVFSP SVGKPEAAPL PVVVYCHGGG FALLSASSAP LDAMCRRFCR ELGAVVVSVN YRRAPEHRHP AAYDDCADVL
201: SYLGTAGLPA DIGVPVDLSR CFLAGDSAGG NIAHHVAHRW TSSAAVASDN PVRLAGIILL QPYFGGEERT EAELRLEGVG PVVNMRRSDW SWKAFLPEGA
301: DRNHPAAHVT GEACPEPELP EEFPPAMVVV GGLDPLQDWQ RRYAAMLQRK GKAVQLVEFP DAIHGFYMFP KLPDAGKLVN DVKNFMETAT SDH

Best Arabidopsis Sequence Match ( AT3G05120.1 )
(BLAST)

001: MAASDEVNLI ESRTVVPLNT WVLISNFKVA YNILRRPDGT FNRHLAEYLD RKVTANANPV DGVFSFDVLI DRRINLLSRV YRPAYADQEQ PPSILDLEKP
101: VDGDIVPVIL FFHGGSFAHS SANSAIYDTL CRRLVGLCKC VVVSVNYRRA PENPYPCAYD DGWIALNWVN SRSWLKSKKD SKVHIFLAGD SSGGNIAHNV
201: ALRAGESGID VLGNILLNPM FGGNERTESE KSLDGKYFVT VRDRDWYWKA FLPEGEDREH PACNPFSPRG KSLEGVSFPK SLVVVAGLDL IRDWQLAYAE
301: GLKKAGQEVK LMHLEKATVG FYLLPNNNHF HNVMDEISAF VNAEC

Arabidopsis Description

GID1AGID1A [Source:UniProtKB/TrEMBL;Acc:A0A178VM30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.