Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G143600.1 | Wheat | cytosol | 97.62 | 97.62 |
| TraesCS2B01G168600.1 | Wheat | cytosol | 96.13 | 96.13 |
| KXG36805 | Sorghum | cytosol | 77.68 | 74.79 |
| Os07t0643100-01 | Rice | plasma membrane | 76.19 | 74.2 |
| Zm00001d022323_P001 | Maize | cytosol, mitochondrion | 75.6 | 74.05 |
| Zm00001d022317_P001 | Maize | mitochondrion, plastid | 66.96 | 64.1 |
| Os07t0643000-01 | Rice | plasma membrane | 66.67 | 63.82 |
| Zm00001d022320_P001 | Maize | plastid | 67.26 | 63.48 |
| TraesCS2D01G147100.1 | Wheat | cytosol | 66.07 | 63.25 |
| OQU90360 | Sorghum | mitochondrion | 69.64 | 63.24 |
| TraesCS2D01G146600.1 | Wheat | plastid | 64.29 | 54.96 |
| TraesCS2D01G146400.1 | Wheat | cytosol | 56.55 | 54.29 |
| TraesCS2D01G146500.1 | Wheat | golgi | 56.55 | 53.67 |
| TraesCS2D01G146300.1 | Wheat | cytosol | 57.44 | 52.88 |
| TraesCS4D01G087700.1 | Wheat | mitochondrion | 47.32 | 46.63 |
| TraesCS4D01G088300.1 | Wheat | cytosol | 46.43 | 45.22 |
| TraesCS2D01G180600.1 | Wheat | plastid | 45.83 | 44.25 |
| TraesCS5D01G435500.1 | Wheat | cytosol | 33.04 | 35.69 |
| TraesCS5D01G435400.1 | Wheat | cytosol | 35.42 | 35.63 |
| TraesCS3D01G132000.1 | Wheat | cytosol | 30.36 | 34.81 |
| TraesCS3D01G131800.1 | Wheat | cytosol | 35.71 | 34.78 |
| TraesCS3D01G131900.1 | Wheat | cytosol | 33.93 | 34.23 |
| TraesCS6D01G292900.1 | Wheat | cytosol | 34.82 | 33.52 |
| TraesCS6D01G310200.1 | Wheat | cytosol | 33.33 | 33.23 |
| TraesCS1D01G254500.1 | Wheat | cytosol | 34.82 | 33.05 |
| TraesCS2D01G249700.1 | Wheat | cytosol | 33.63 | 32.29 |
| TraesCS2D01G249500.1 | Wheat | mitochondrion, plastid | 35.42 | 32.25 |
| TraesCS7D01G414500.1 | Wheat | cytosol | 32.14 | 32.14 |
| TraesCS6D01G277700.1 | Wheat | plastid | 34.82 | 32.05 |
| TraesCS4D01G219100.1 | Wheat | mitochondrion | 33.93 | 31.75 |
| TraesCS7D01G450900.1 | Wheat | cytosol | 31.55 | 31.45 |
| TraesCS1D01G256400.1 | Wheat | cytosol | 33.04 | 31.01 |
| TraesCS4D01G278400.1 | Wheat | cytosol | 30.36 | 30.36 |
| TraesCS1D01G256800.1 | Wheat | cytosol | 31.25 | 29.49 |
| TraesCS3D01G516500.1 | Wheat | cytosol | 28.87 | 28.96 |
| TraesCS4D01G222700.1 | Wheat | peroxisome | 27.68 | 28.1 |
| TraesCS7D01G271500.1 | Wheat | cytosol | 28.87 | 27.48 |
| TraesCS5D01G082900.1 | Wheat | cytosol, peroxisome, plasma membrane | 27.98 | 26.4 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G147200.1 | EnsemblPlantsGene:TraesCS2D01G147200 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016787 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_3 | InterPro:IPR029058 | PANTHER:PTHR23024 |
| PANTHER:PTHR23024:SF133 | PFAM:PF07859 | SEG:seg | SUPFAM:SSF53474 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr2D:+:88120427..88121437
Molecular Weight (calculated)
36212.2 Da
IEP (calculated)
7.664
GRAVY (calculated)
-0.013
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGTEDARPP PALPWTVRLQ FAALSLAHRP DGSVRRFLFS LGDLHAAARP RPDASGVRSA DVTVDASRGL WARVFSPSSA ADAPVPVVVY FHGGGFVLFS
101: AASRPYDAFC RRLCHGLGAV VVSVNYRLAP KHRFPAAYDD GVDVLRYLDT NGLPADLAVP VDLSRCFLAG DSAGGNITHH VAQRWSAMTT TASPSSLRLA
201: GVVLIQPFFG GEERTEAEVT LDKVGPSLSM VVTDAYWREF LPEGATRDHP AARVCGERVE LAEAFPPAMV VVGGLDLLKG WQTRYVEALR GKGKPVKVVE
301: YPDAIHGFHA FPEIADSGKL VGDIKLFVDE RRPTKS
101: AASRPYDAFC RRLCHGLGAV VVSVNYRLAP KHRFPAAYDD GVDVLRYLDT NGLPADLAVP VDLSRCFLAG DSAGGNITHH VAQRWSAMTT TASPSSLRLA
201: GVVLIQPFFG GEERTEAEVT LDKVGPSLSM VVTDAYWREF LPEGATRDHP AARVCGERVE LAEAFPPAMV VVGGLDLLKG WQTRYVEALR GKGKPVKVVE
301: YPDAIHGFHA FPEIADSGKL VGDIKLFVDE RRPTKS
001: MAASDEVNLI ESRTVVPLNT WVLISNFKVA YNILRRPDGT FNRHLAEYLD RKVTANANPV DGVFSFDVLI DRRINLLSRV YRPAYADQEQ PPSILDLEKP
101: VDGDIVPVIL FFHGGSFAHS SANSAIYDTL CRRLVGLCKC VVVSVNYRRA PENPYPCAYD DGWIALNWVN SRSWLKSKKD SKVHIFLAGD SSGGNIAHNV
201: ALRAGESGID VLGNILLNPM FGGNERTESE KSLDGKYFVT VRDRDWYWKA FLPEGEDREH PACNPFSPRG KSLEGVSFPK SLVVVAGLDL IRDWQLAYAE
301: GLKKAGQEVK LMHLEKATVG FYLLPNNNHF HNVMDEISAF VNAEC
101: VDGDIVPVIL FFHGGSFAHS SANSAIYDTL CRRLVGLCKC VVVSVNYRRA PENPYPCAYD DGWIALNWVN SRSWLKSKKD SKVHIFLAGD SSGGNIAHNV
201: ALRAGESGID VLGNILLNPM FGGNERTESE KSLDGKYFVT VRDRDWYWKA FLPEGEDREH PACNPFSPRG KSLEGVSFPK SLVVVAGLDL IRDWQLAYAE
301: GLKKAGQEVK LMHLEKATVG FYLLPNNNHF HNVMDEISAF VNAEC
Arabidopsis Description
GID1AGID1A [Source:UniProtKB/TrEMBL;Acc:A0A178VM30]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.