Factsheet for TraesCS4D01G219100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G425200.2
TraesCS1B01G459600.2
TraesCS1D01G434200.2
TraesCS3A01G224200.2
TraesCS3A01G256000.1
TraesCS3B01G253700.2
TraesCS3B01G284700.1
TraesCS3B01G288800.1
TraesCS3D01G229400.1
TraesCS3D01G253600.1
TraesCS4A01G182300.1
TraesCS4B01G136100.2
TraesCS4D01G130900.1
TraesCS5A01G153500.1
TraesCS5B01G152300.1
TraesCS5D01G158800.1
TraesCS7A01G336000.1
TraesCS7A01G351500.1
TraesCS7B01G247600.1
TraesCS7B01G276600.1
TraesCS7D01G343700.1
TraesCS7D01G371500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G16080.1	TraesCS4A01G182300.1	AT3G08530.1	21798944
AT5G16080.1	TraesCS4B01G136100.2	AT3G08530.1	21798944
AT5G16080.1	TraesCS4D01G130900.1	AT3G08530.1	21798944
AT5G16080.1	TraesCS5A01G153500.1	AT3G08530.1	21798944
AT5G16080.1	TraesCS5B01G152300.1	AT3G08530.1	21798944
AT5G16080.1	TraesCS5D01G158800.1	AT3G08530.1	21798944
AT5G16080.1	TraesCS3A01G256000.1	AT4G00980.1	21798944
AT5G16080.1	TraesCS3B01G284700.1	AT4G00980.1	21798944
AT5G16080.1	TraesCS3B01G288800.1	AT4G00980.1	21798944
AT5G16080.1	TraesCS3D01G253600.1	AT4G00980.1	21798944
AT5G16080.1	TraesCS1A01G425200.2	AT4G01090.1	21798944
AT5G16080.1	TraesCS1B01G459600.2	AT4G01090.1	21798944
AT5G16080.1	TraesCS1D01G434200.2	AT4G01090.1	21798944
AT5G16080.1	TraesCS3A01G224200.2	AT4G01090.1	21798944
AT5G16080.1	TraesCS3B01G253700.2	AT4G01090.1	21798944
AT5G16080.1	TraesCS3D01G229400.1	AT4G01090.1	21798944
AT5G16080.1	TraesCS7A01G336000.1	AT4G01090.1	21798944
AT5G16080.1	TraesCS7A01G351500.1	AT4G01090.1	21798944
AT5G16080.1	TraesCS7B01G247600.1	AT4G01090.1	21798944
AT5G16080.1	TraesCS7B01G276600.1	AT4G01090.1	21798944
AT5G16080.1	TraesCS7D01G343700.1	AT4G01090.1	21798944
AT5G16080.1	TraesCS7D01G371500.1	AT4G01090.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G218900.1	Wheat	mitochondrion	97.49	97.77
HORVU4Hr1G062060.1	Barley	mitochondrion	95.82	97.73
TraesCS4A01G085300.1	Wheat	mitochondrion	97.77	97.5
Os03t0258200-01	Rice	mitochondrion	83.57	81.74
EER95156	Sorghum	mitochondrion	83.29	80.38
Zm00001d047883_P001	Maize	mitochondrion	81.89	79.46
GSMUA_Achr6P16980_001	Banana	mitochondrion	57.1	69.26
GSMUA_Achr10P...	Banana	cytosol	54.32	66.1
VIT_14s0006g03180.t01	Wine grape	cytosol	56.82	59.65
PGSC0003DMT400033010	Potato	cytosol	51.25	55.59
KRG90787	Soybean	cytosol, mitochondrion	54.32	55.4
VIT_01s0011g03270.t01	Wine grape	cytosol	54.6	55.37
KRH01780	Soybean	cytosol	52.09	55.0
KRH35975	Soybean	cytosol	47.08	53.48
Solyc02g085800.1.1	Tomato	cytosol	50.42	52.77
KRH46912	Soybean	cytosol	51.81	51.38
PGSC0003DMT400033749	Potato	cytosol	47.35	49.13
Bra004026.1-P	Field mustard	cytosol	44.85	49.09
CDY70129	Canola	cytosol	45.4	48.95
Solyc05g009610.1.1	Tomato	cytosol	46.8	48.7
CDX69476	Canola	cytosol	44.29	47.89
Bra008651.1-P	Field mustard	cytosol	44.29	47.89
AT5G16080.1	Thale cress	cytosol	45.4	47.38
Bra027693.1-P	Field mustard	cytosol	44.29	47.18
Bra038363.1-P	Field mustard	cytosol	44.29	47.18
Bra004326.1-P	Field mustard	cytosol	43.45	46.71
Bra004327.1-P	Field mustard	cytosol	43.45	46.71
AT1G68620.1	Thale cress	cytosol	42.62	45.54
TraesCS3D01G132000.1	Wheat	cytosol	31.48	38.57
TraesCS7D01G414500.1	Wheat	cytosol	34.54	36.9
TraesCS3D01G131900.1	Wheat	cytosol	33.7	36.34
TraesCS5D01G435400.1	Wheat	cytosol	33.7	36.23
TraesCS6D01G292900.1	Wheat	cytosol	34.82	35.82
TraesCS3D01G131800.1	Wheat	cytosol	34.26	35.65
TraesCS4D01G222700.1	Wheat	peroxisome	32.59	35.35
TraesCS1D01G256400.1	Wheat	cytosol	35.1	35.2
TraesCS1D01G256800.1	Wheat	cytosol	34.82	35.11
TraesCS5D01G435500.1	Wheat	cytosol	30.36	35.05
TraesCS2D01G180600.1	Wheat	plastid	33.7	34.77
TraesCS7D01G271500.1	Wheat	cytosol	33.98	34.56
TraesCS2D01G147200.1	Wheat	cytosol	31.75	33.93
TraesCS4D01G278400.1	Wheat	cytosol	31.75	33.93
TraesCS2D01G249700.1	Wheat	cytosol	32.87	33.71
TraesCS6D01G277700.1	Wheat	plastid	34.26	33.7
TraesCS3D01G516500.1	Wheat	cytosol	31.2	33.43
TraesCS4D01G088300.1	Wheat	cytosol	32.03	33.33
TraesCS5D01G082900.1	Wheat	cytosol, peroxisome, plasma membrane	32.87	33.15
TraesCS4D01G087700.1	Wheat	mitochondrion	31.48	33.14
TraesCS2D01G249500.1	Wheat	mitochondrion, plastid	33.98	33.06
TraesCS2D01G146500.1	Wheat	golgi	32.59	33.05
TraesCS6D01G310200.1	Wheat	cytosol	30.92	32.94
TraesCS7D01G450900.1	Wheat	cytosol	30.64	32.64
TraesCS2D01G147100.1	Wheat	cytosol	29.8	30.48
TraesCS1D01G254500.1	Wheat	cytosol	28.97	29.38
TraesCS2D01G146400.1	Wheat	cytosol	28.41	29.14
TraesCS2D01G146300.1	Wheat	cytosol	28.97	28.49
TraesCS2D01G146600.1	Wheat	plastid	27.58	25.19

Protein Annotations

EnsemblPlants:TraesCS4D01G219100.1	EnsemblPlantsGene:TraesCS4D01G219100	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	PANTHER:PTHR23024
PANTHER:PTHR23024:SF93	PFAM:PF07859	SEG:seg	SUPFAM:SSF53474	MapMan:35.1	:

Description

No Description!

Coordinates

chr4D:-:374599019..374600098

Molecular Weight (calculated)

38418.1 Da

IEP (calculated)

9.699

GRAVY (calculated)

-0.035

Length

359 amino acids

Sequence
(BLAST)

001: MIRRRMGALH VGEPRVSFQQ QVGKNGGGHG AVVEEIHGLI RVYKDGHVER LPAIPDVPCT WGSTAAASGV LARDVAVDRA TGVWARLYAP AAAAGKVPVV
101: VYFHGGGFSV GSAAWSCYHE FLAQLPARAG CAVMSVDYRL APENRLPAAF DDGLTALRWL RQQASRNAAA SDEVSWWRSR CRFDRVFLMG DSAGAAIAFH
201: VAARAGQGQL GALAPLSVKG AILIQPFFGG EARTASEKSM PQPPGSALSL STSDSYWRMA LPAGAGRDHP WCNPLARGAP RLETLALPPV LVCISEADIL
301: RDRNLELCRA LRKAGKSVEQ ATYGGVGHAF QVLHNCHLSQ PRTQEMLAHI RAFVSARSS

Best Arabidopsis Sequence Match ( AT5G16080.1 )
(BLAST)

001: MATISFSHNH QSSDNRRGGS HHHRHGPVVE EIEGLIKVFN DGCVERPPIV PIVSPTIHPS SKATAFDIKL SNDTWTRVYI PDAAAASPSV TLPLLVYFHG
101: GGFCVGSAAW SCYHDFLTSL AVKARCVIVS VNYRLAPEHR LPAAYDDGVN VVSWLVKQQI STGGGYPSWL SKCNLSNVFL AGDSAGANIA YQVAVRIMAS
201: GKYANTLHLK GIILIHPFFG GESRTSSEKQ QHHTKSSALT LSASDAYWRL ALPRGASRDH PWCNPLMSSA GAKLPTTMVF MAEFDILKER NLEMCKVMRS
301: HGKRVEGIVH GGVGHAFHIL DNSSVSRDRI HDMMCRLHNF IHPS

Arabidopsis Description

CXE17Probable carboxylesterase 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFR7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.