CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 6
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88427
EES03295
EES07849
KXG22639
KXG22761
KXG29961
KXG33215

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G16080.1	EES07849	AT3G08530.1	21798944
AT5G16080.1	KXG22761	AT3G08530.1	21798944
AT5G16080.1	KXG33215	AT4G00980.1	21798944
AT5G16080.1	EER88427	AT4G01090.1	21798944
AT5G16080.1	EES03295	AT4G01090.1	21798944
AT5G16080.1	KXG22639	AT4G01090.1	21798944
AT5G16080.1	KXG29961	AT4G01090.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047883_P001	Maize	mitochondrion	90.05	90.54
TraesCS4D01G219100.1	Wheat	mitochondrion	80.38	83.29
TraesCS4B01G218900.1	Wheat	mitochondrion	79.84	82.96
HORVU4Hr1G062060.1	Barley	mitochondrion	77.96	82.39
TraesCS4A01G085300.1	Wheat	mitochondrion	79.57	82.22
Os03t0258200-01	Rice	mitochondrion	76.08	77.11
GSMUA_Achr6P16980_001	Banana	mitochondrion	55.11	69.26
GSMUA_Achr10P...	Banana	cytosol	52.69	66.44
VIT_14s0006g03180.t01	Wine grape	cytosol	52.69	57.31
KRG90787	Soybean	cytosol, mitochondrion	50.81	53.69
VIT_01s0011g03270.t01	Wine grape	cytosol	50.81	53.39
PGSC0003DMT400033010	Potato	cytosol	47.31	53.17
KRH01780	Soybean	cytosol	48.39	52.94
KRH35975	Soybean	cytosol	44.89	52.85
Bra004026.1-P	Field mustard	cytosol	44.62	50.61
CDY70129	Canola	cytosol	45.16	50.45
Solyc02g085800.1.1	Tomato	cytosol	46.51	50.44
Bra008651.1-P	Field mustard	cytosol	44.35	49.7
CDX69476	Canola	cytosol	44.35	49.7
KRH46912	Soybean	cytosol	48.12	49.45
PGSC0003DMT400033749	Potato	cytosol	45.7	49.13
Bra027693.1-P	Field mustard	cytosol	44.35	48.96
Bra038363.1-P	Field mustard	cytosol	44.35	48.96
Solyc05g009610.1.1	Tomato	cytosol	44.89	48.41
AT5G16080.1	Thale cress	cytosol	44.62	48.26
Bra004326.1-P	Field mustard	cytosol	43.28	48.2
Bra004327.1-P	Field mustard	cytosol	43.28	48.2
AT1G68620.1	Thale cress	cytosol	42.47	47.02
OQU88478	Sorghum	cytosol	36.02	40.48
OQU88480	Sorghum	cytosol	34.95	39.76
EER98020	Sorghum	cytosol	37.37	39.71
EES00296	Sorghum	cytosol	34.68	37.94
EES18227	Sorghum	cytosol	36.83	37.85
EER90762	Sorghum	cytosol	33.33	37.35
EES00295	Sorghum	mitochondrion, plastid	26.61	37.22
OQU86289	Sorghum	cytosol	31.99	36.73
EES18228	Sorghum	cytosol	35.75	36.64
EER95897	Sorghum	cytosol	36.02	36.51
EER98021	Sorghum	cytosol, extracellular, peroxisome	36.02	36.31
EER98018	Sorghum	cytosol	32.53	35.91
EES14122	Sorghum	cytosol	32.53	35.48
EES09618	Sorghum	endoplasmic reticulum, vacuole	35.22	34.93
EER98685	Sorghum	cytosol	31.72	34.81
KXG36805	Sorghum	cytosol	32.53	34.67
EER92547	Sorghum	cytosol	30.11	33.84
OQU79889	Sorghum	cytosol	24.46	33.7
OQU90362	Sorghum	mitochondrion, plastid	29.3	33.23
EES08277	Sorghum	plastid	31.72	33.05
EER97518	Sorghum	plastid	30.11	32.46
EES08278	Sorghum	plastid	29.57	31.43
EER99798	Sorghum	plastid	29.3	30.62
OQU90360	Sorghum	mitochondrion	28.23	28.38
KXG21982	Sorghum	cytosol	26.08	27.32
OQU86288	Sorghum	mitochondrion	26.34	23.84

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	EntrezGene:8078830	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	UniProt:C5WQT2
EnsemblPlants:EER95156	ProteinID:EER95156	ProteinID:EER95156.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	InterPro:IPR029058	PFAM:PF07859	PANTHER:PTHR23024
PANTHER:PTHR23024:SF93	EnsemblPlantsGene:SORBI_3001G431500	SUPFAM:SSF53474	unigene:Sbi.853	UniParc:UPI0001A83226	RefSeq:XP_002468158.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:71047782..71048900

Molecular Weight (calculated)

39881.1 Da

IEP (calculated)

9.088

GRAVY (calculated)

0.009

Length

372 amino acids

Sequence
(BLAST)

001: MRRRRMGALH VVGEPRVVSF QQQPAAVVAK NGHGPVVEEI HGLIRVYKDG HVERLPAIPT VPCTWGGTGA DAPGGVVARD VVVDPATGVW ARLYAPMTTT
101: TSAGGGTGGS RPPVVVYFHG GGFCVGSAAW SCYHEFLAQL SARAGCAVMS VDYRLAPEHR LPAAFDDGLA AVRWLRHQAS RAAACDDLSW WRARCGFDRV
201: FLMGDSAGAS IAFHVAARLG QGHLGALSPL TVRGAVLIQP FFGGEARTVS EKSMAQPPRS ALTLATSDCY WRLALPAGAS SRDHPWCNPL SRAAPRLETV
301: PLPPVLVCVS ETDILRDRNL ELCRAMRKAG KCVEQAMYGG VGHAFQVLHN CHLSQPRTQE MLAHIKAFVS AR

Best Arabidopsis Sequence Match ( AT5G16080.1 )
(BLAST)

001: MATISFSHNH QSSDNRRGGS HHHRHGPVVE EIEGLIKVFN DGCVERPPIV PIVSPTIHPS SKATAFDIKL SNDTWTRVYI PDAAAASPSV TLPLLVYFHG
101: GGFCVGSAAW SCYHDFLTSL AVKARCVIVS VNYRLAPEHR LPAAYDDGVN VVSWLVKQQI STGGGYPSWL SKCNLSNVFL AGDSAGANIA YQVAVRIMAS
201: GKYANTLHLK GIILIHPFFG GESRTSSEKQ QHHTKSSALT LSASDAYWRL ALPRGASRDH PWCNPLMSSA GAKLPTTMVF MAEFDILKER NLEMCKVMRS
301: HGKRVEGIVH GGVGHAFHIL DNSSVSRDRI HDMMCRLHNF IHPS

Arabidopsis Description

CXE17Probable carboxylesterase 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFR7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.