CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039799_P001	Maize	cytosol	46.72	56.64
Zm00001d039795_P001	Maize	cytosol	34.79	55.21
OQU86289	Sorghum	cytosol	42.34	53.7
TraesCS3D01G132000.1	Wheat	cytosol	37.23	52.22
TraesCS3B01G150100.1	Wheat	cytosol	40.15	50.46
TraesCS3A01G307000.1	Wheat	cytosol	39.66	49.85
TraesCS3A01G131200.1	Wheat	cytosol	40.39	48.97
TraesCS3B01G150400.1	Wheat	cytosol	39.66	48.95
EES00295	Sorghum	mitochondrion, plastid	31.63	48.87
TraesCS3D01G131900.1	Wheat	cytosol	39.42	48.65
TraesCS3A01G307200.1	Wheat	cytosol	38.69	48.62
EES00296	Sorghum	cytosol	40.15	48.53
TraesCS3B01G150200.1	Wheat	cytosol	39.42	48.5
TraesCS3D01G131800.1	Wheat	cytosol	40.63	48.41
HORVU3Hr1G024890.2	Barley	cytosol	39.17	48.06
TraesCS3B01G150500.1	Wheat	cytosol	38.2	48.01
TraesCS3A01G307100.1	Wheat	cytosol	38.69	47.6
TraesCS3B01G150000.1	Wheat	cytosol	37.96	47.13
HORVU3Hr1G024660.1	Barley	cytosol	39.66	45.66
EER90762	Sorghum	cytosol	36.5	45.18
Os01t0153800-00	Rice	cytosol	39.17	43.87
EER98685	Sorghum	cytosol	35.04	42.48
VIT_06s0009g00980.t01	Wine grape	cytosol	32.36	41.96
VIT_08s0032g00700.t01	Wine grape	cytosol	31.87	41.32
EER98018	Sorghum	cytosol	33.09	40.36
EER98020	Sorghum	cytosol	34.31	40.29
VIT_08s0032g00510.t01	Wine grape	cytosol	31.14	39.38
KRH25344	Soybean	peroxisome	28.95	38.76
KRH68056	Soybean	cytosol	30.41	38.58
KRG96320	Soybean	cytosol	30.41	38.58
OQU88480	Sorghum	cytosol	30.66	38.53
OQU88478	Sorghum	cytosol	30.9	38.37
CDX81008	Canola	cytosol	31.14	38.32
Bra005899.1-P	Field mustard	cytosol	30.9	38.02
Solyc11g071720.1.1	Tomato	cytosol, extracellular	29.68	37.89
PGSC0003DMT400007788	Potato	cytosol	29.68	37.89
EER95897	Sorghum	cytosol	33.82	37.87
KRH56173	Soybean	cytosol	30.17	37.69
CDX70090	Canola	cytosol	29.93	37.05
KRH32935	Soybean	cytosol	29.68	36.75
CDX98936	Canola	cytosol	29.68	36.75
Bra009207.1-P	Field mustard	cytosol	29.68	36.75
EER98021	Sorghum	cytosol, extracellular, peroxisome	32.6	36.31
KRH71756	Soybean	cytosol	28.95	35.84
AT5G06570.3	Thale cress	cytosol	29.93	35.76
CDY55764	Canola	cytosol	19.95	35.04
OQU79889	Sorghum	cytosol	21.17	32.22
PGSC0003DMT400022327	Potato	cytosol	19.22	31.98
Solyc11g045460.1.1	Tomato	cytosol	19.22	31.98
OQU90362	Sorghum	mitochondrion, plastid	24.33	30.49
EES08278	Sorghum	plastid	24.33	28.57
EES14122	Sorghum	cytosol	23.36	28.15
EES18228	Sorghum	cytosol	24.09	27.27
KXG36805	Sorghum	cytosol	22.87	26.93
EES18227	Sorghum	cytosol	23.6	26.8
EER95156	Sorghum	mitochondrion	23.84	26.34
EER99798	Sorghum	plastid	22.63	26.12
EES08277	Sorghum	plastid	22.38	25.77
EER97518	Sorghum	plastid	21.17	25.22
KXG21982	Sorghum	cytosol	21.65	25.07
EES09618	Sorghum	endoplasmic reticulum, vacuole	22.87	25.07
OQU90360	Sorghum	mitochondrion	22.14	24.59
EER92547	Sorghum	cytosol	19.22	23.87

Protein Annotations

EnsemblPlants:OQU86288	EnsemblPlantsGene:SORBI_3003G065501	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	PANTHER:PTHR23024
PANTHER:PTHR23024:SF204	PFAM:PF07859	ProteinID:OQU86288	ProteinID:OQU86288.1	SEG:seg	SUPFAM:SSF53474
UniParc:UPI0009DC908C	UniProt:A0A1W0VVX5	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:5609314..5612502

Molecular Weight (calculated)

44919.2 Da

IEP (calculated)

11.955

GRAVY (calculated)

-0.347

Length

411 amino acids

Sequence
(BLAST)

001: MKVRIPLSRP IGRRPRHTAL SGRGPCGDLL EKEEYIKQTH ARTQDDQPRA LQILSPSASS THHVRHHHHR TARRRGGLAR HRPAPQRRFR RPRRRIRGHS
101: TGSGIPRRPG RSLEGRRVRP CAPPQGPPVQ DVAGGGAGRG AQIRQAAPGA RLLPRRRLLH RCLRPTRVPR LLPRQHVAAE VPAVVLSVQY RLAPEHRLPA
201: AIDDAATFFF WLRAQAAPAP AAAAAAADPW LAESADFSRT FVSGVSAGSN LAHHVVVQIA SGQIVPGAVR VAGYFLFSPF FGSDERVASE SHPPAGVSVT
301: VQMLDVAWRM ALPLGATRDH PLANPFGPDS PSLQPLPLPP VLLEAPGRDV LYDHVLRYAA RLKEMGKAVE LVEFAEERHG FSVGQWSEAT EELMHILKQF
401: INGGAAAAVL K

Best Arabidopsis Sequence Match ( AT5G06570.1 )
(BLAST)

001: MGSLGEEPQV AEDCMGLLQL LSNGTVLRSE SIDLITQQIP FKNNQTVLFK DSIYHKPNNL HLRLYKPISA SNRTALPVVV FFHGGGFCFG SRSWPHFHNF
101: CLTLASSLNA LVVSPDYRLA PEHRLPAAFE DAEAVLTWLW DQAVSDGVNH WFEDGTDVDF DRVFVVGDSS GGNIAHQLAV RFGSGSIELT PVRVRGYVLM
201: GPFFGGEERT NSENGPSEAL LSLDLLDKFW RLSLPNGATR DHHMANPFGP TSPTLESISL EPMLVIVGGS ELLRDRAKEY AYKLKKMGGK RVDYIEFENK
301: EHGFYSNYPS SEAAEQVLRI IGDFMNNLS

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G06570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.