CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 2
plastid 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008635_P001	Maize	cytosol	78.57	61.47
Os01t0155000-02	Rice	cytosol	58.65	46.29
EER90762	Sorghum	cytosol	56.77	45.48
OQU88480	Sorghum	cytosol	50.75	41.28
EES00296	Sorghum	cytosol	51.5	40.29
EER98685	Sorghum	cytosol	50.75	39.82
OQU86289	Sorghum	cytosol	48.5	39.81
EER98018	Sorghum	cytosol	49.25	38.87
OQU88478	Sorghum	cytosol	48.12	38.67
EER98020	Sorghum	cytosol	50.0	38.0
KRH25344	Soybean	peroxisome	43.23	37.46
CDX81008	Canola	cytosol	46.99	37.43
VIT_06s0009g00980.t01	Wine grape	cytosol	44.36	37.22
Bra005899.1-P	Field mustard	cytosol	46.62	37.13
VIT_08s0032g00700.t01	Wine grape	cytosol	43.98	36.91
CDX70090	Canola	cytosol	45.49	36.45
KRH68056	Soybean	cytosol	44.36	36.42
CDX98936	Canola	cytosol	45.11	36.14
Bra009207.1-P	Field mustard	cytosol	45.11	36.14
KRG96320	Soybean	cytosol	43.98	36.11
EER95897	Sorghum	cytosol	49.25	35.69
EER98021	Sorghum	cytosol, extracellular, peroxisome	49.25	35.5
VIT_08s0032g00510.t01	Wine grape	cytosol	43.23	35.38
KRH32935	Soybean	cytosol	43.61	34.94
AT5G06570.3	Thale cress	cytosol	45.11	34.88
PGSC0003DMT400007788	Potato	cytosol	42.11	34.78
Solyc11g071720.1.1	Tomato	cytosol, extracellular	42.11	34.78
KRH71756	Soybean	cytosol	42.86	34.34
KRH56173	Soybean	cytosol	42.11	34.04
CDY55764	Canola	cytosol	29.32	33.33
OQU86288	Sorghum	mitochondrion	48.87	31.63
PGSC0003DMT400022327	Potato	cytosol	27.82	29.96
Solyc11g045460.1.1	Tomato	cytosol	27.07	29.15
OQU90362	Sorghum	mitochondrion, plastid	34.59	28.05
EES14122	Sorghum	cytosol	34.59	26.98
EES18227	Sorghum	cytosol	36.47	26.8
OQU79889	Sorghum	cytosol	27.07	26.67
KXG36805	Sorghum	cytosol	34.96	26.65
EER95156	Sorghum	mitochondrion	37.22	26.61
OQU90360	Sorghum	mitochondrion	36.84	26.49
EER97518	Sorghum	plastid	33.83	26.09
EES18228	Sorghum	cytosol	35.34	25.9
EER99798	Sorghum	plastid	33.46	25.0
EES08277	Sorghum	plastid	33.08	24.65
EES08278	Sorghum	plastid	31.95	24.29
EES09618	Sorghum	endoplasmic reticulum, vacuole	34.21	24.27
EER92547	Sorghum	cytosol	29.7	23.87
KXG21982	Sorghum	cytosol	28.57	21.41

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	EntrezGene:8059129	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	UniProt:C5XPA7
EnsemblPlants:EES00295	ProteinID:EES00295	ProteinID:EES00295.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	InterPro:IPR029058	PFAM:PF07859	PANTHER:PTHR23024
PANTHER:PTHR23024:SF224	EnsemblPlantsGene:SORBI_3003G065300	SUPFAM:SSF53474	UniParc:UPI0001A846A5	RefSeq:XP_002455175.1	SEG:seg

Description

hypothetical protein

Coordinates

chr3:+:5602712..5603700

Molecular Weight (calculated)

28744.2 Da

IEP (calculated)

6.995

GRAVY (calculated)

-0.037

Length

266 amino acids

Sequence
(BLAST)

001: MYFHSGGFCL GTFSQPNFHS GCLRLASELP AVVVSADYRL GPEHRLPAAI DDAAAALSWL RDQHATAVGV AGAHHHHRWL AESADFTRVF VAGESSGANM
101: SHHVAVRHGS GELPLAPLRV AGHVLLTPFF SGVHRTAAEA SPSPPPAAVS PPSFTTEMAD TMWRLSLPVG ATRDHPVTNP FGPGSPALGA VAFPRVLVVS
201: AGRDILHERV LRYAARLQEM EKPVEVVVLE EQEHAFFSRQ PWSHGTSEMI RVVPRFVYGE NCAECK

Best Arabidopsis Sequence Match ( AT5G06570.1 )
(BLAST)

001: MGSLGEEPQV AEDCMGLLQL LSNGTVLRSE SIDLITQQIP FKNNQTVLFK DSIYHKPNNL HLRLYKPISA SNRTALPVVV FFHGGGFCFG SRSWPHFHNF
101: CLTLASSLNA LVVSPDYRLA PEHRLPAAFE DAEAVLTWLW DQAVSDGVNH WFEDGTDVDF DRVFVVGDSS GGNIAHQLAV RFGSGSIELT PVRVRGYVLM
201: GPFFGGEERT NSENGPSEAL LSLDLLDKFW RLSLPNGATR DHHMANPFGP TSPTLESISL EPMLVIVGGS ELLRDRAKEY AYKLKKMGGK RVDYIEFENK
301: EHGFYSNYPS SEAAEQVLRI IGDFMNNLS

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G06570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.