CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 1
plastid 1
extracellular 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018855_P001	Maize	extracellular	81.57	81.79
EER98020	Sorghum	cytosol	72.63	76.57
EER95897	Sorghum	cytosol	70.46	70.84
HORVU6Hr1G077260.1	Barley	cytosol	64.77	67.71
TraesCS6A01G313200.1	Wheat	cytosol	63.69	67.34
TraesCS6D01G292900.1	Wheat	cytosol	63.41	67.05
TraesCS6B01G343600.1	Wheat	cytosol	62.87	66.48
TraesCS2D01G249700.1	Wheat	cytosol	62.6	66.0
OQU79889	Sorghum	cytosol	44.44	60.74
OQU88480	Sorghum	cytosol	49.05	55.35
VIT_06s0009g00980.t01	Wine grape	cytosol	44.99	52.37
OQU86289	Sorghum	cytosol	44.99	51.23
EER90762	Sorghum	cytosol	46.07	51.2
EES00296	Sorghum	cytosol	46.61	50.59
CDY55764	Canola	cytosol	31.98	50.43
CDX81008	Canola	cytosol	45.53	50.3
Bra005899.1-P	Field mustard	cytosol	45.26	50.0
EER98018	Sorghum	cytosol	45.53	49.85
KRH32935	Soybean	cytosol	44.72	49.7
PGSC0003DMT400007788	Potato	cytosol	43.36	49.69
VIT_08s0032g00700.t01	Wine grape	cytosol	42.55	49.53
EES00295	Sorghum	mitochondrion, plastid	35.5	49.25
KRG96320	Soybean	cytosol	43.09	49.07
KRH68056	Soybean	cytosol	43.09	49.07
OQU88478	Sorghum	cytosol	43.9	48.94
Solyc11g071720.1.1	Tomato	cytosol, extracellular	42.55	48.76
EER98685	Sorghum	cytosol	44.44	48.38
CDX70090	Canola	cytosol	43.36	48.19
VIT_08s0032g00510.t01	Wine grape	cytosol	42.28	48.0
KRH71756	Soybean	cytosol	43.09	47.89
CDX98936	Canola	cytosol	42.82	47.59
Bra009207.1-P	Field mustard	cytosol	42.82	47.59
KRH25344	Soybean	peroxisome	39.57	47.56
KRH56173	Soybean	cytosol	42.28	47.42
AT5G06570.3	Thale cress	cytosol	43.9	47.09
PGSC0003DMT400022327	Potato	cytosol	28.18	42.11
Solyc11g045460.1.1	Tomato	cytosol	27.37	40.89
EER95156	Sorghum	mitochondrion	36.31	36.02
KXG36805	Sorghum	cytosol	31.98	33.81
EES18227	Sorghum	cytosol	33.06	33.7
OQU90362	Sorghum	mitochondrion, plastid	29.81	33.54
EER97518	Sorghum	plastid	30.89	33.04
OQU86288	Sorghum	mitochondrion	36.31	32.6
EES08278	Sorghum	plastid	30.62	32.29
EES18228	Sorghum	cytosol	31.44	31.96
EES08277	Sorghum	plastid	30.35	31.37
EES09618	Sorghum	endoplasmic reticulum, vacuole	31.71	31.2
EES14122	Sorghum	cytosol	28.73	31.09
OQU90360	Sorghum	mitochondrion	30.89	30.81
EER99798	Sorghum	plastid	28.73	29.78
KXG21982	Sorghum	cytosol	27.64	28.73
EER92547	Sorghum	cytosol	24.66	27.49

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	EntrezGene:8081155	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	UniProt:C5XA94
EnsemblPlants:EER98021	ProteinID:EER98021	ProteinID:EER98021.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	InterPro:IPR029058	PFAM:PF07859	PFscan:PS51257
PANTHER:PTHR23024	PANTHER:PTHR23024:SF162	EnsemblPlantsGene:SORBI_3002G042200	SUPFAM:SSF53474	unigene:Sbi.5356	UniParc:UPI0001A841C1
RefSeq:XP_002461500.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:4028950..4030768

Molecular Weight (calculated)

38298.5 Da

IEP (calculated)

5.757

GRAVY (calculated)

0.184

Length

369 amino acids

Sequence
(BLAST)

001: MHVNKGMPTM PAGVSVAAAG CCPTATPANE VVEDIFGLVR VLSDGTVVRS PAGPVFCPTT FPENHPSVEW KEAVYGKANN LLVRMYKPSA SPAGGKKAPV
101: LVHFHGGGFC IGSCTWGNVH AFCLRLAADT GAVVLSAGYR LAPEHRLPAA VDDGAAFMRW LREQSSSSSD AWLTEAADFG RVFVTGDSAG ATIAHHLAVR
201: AGVGVATDDA GEAAGEADQV TIRGYVLLLP FFGGVERTPS EQAECPAGAG SVLSLDVLDR FWRVSLPAGA TRDHPVANPF GPDSPELGSV DFRPVLVVVA
301: GLDLLRDRAV GYAGRLAAVG KPVELVEFAG AAHGFFLHEP GSEATGELIR AVRRFVDSCV VSASEAAAA

Best Arabidopsis Sequence Match ( AT5G06570.3 )
(BLAST)

001: MTLIHISKTK RERLRMGSLG EEPQVAEDCM GLLQLLSNGT VLRSESIDLI TQQIPFKNNQ TVLFKDSIYH KPNNLHLRLY KPISASNRTA LPVVVFFHGG
101: GFCFGSRSWP HFHNFCLTLA SSLNALVVSP DYRLAPEHRL PAAFEDAEAV LTWLWDQAVS DGVNHWFEDG TDVDFDRVFV VGDSSGGNIA HQLAVRFGSG
201: SIELTPVRVR GYVLMGPFFG GEERTNSENG PSEALLSLDL LDKFWRLSLP NGATRDHHMA NPFGPTSPTL ESISLEPMLV IVGGSELLRD RAKEYAYKLK
301: KMGGKRVDYI EFENKEHGFY SNYPSSEAAE QVLRIIGDFM NNLS

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G06570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.