CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018853_P001	Maize	cytosol, plastid	83.65	88.99
OQU79889	Sorghum	cytosol	60.49	82.22
EER98020	Sorghum	cytosol	74.66	78.29
EER98021	Sorghum	cytosol, extracellular, peroxisome	70.84	70.46
TraesCS6A01G313200.1	Wheat	cytosol	64.31	67.62
TraesCS6D01G292900.1	Wheat	cytosol	64.31	67.62
TraesCS6B01G343600.1	Wheat	cytosol	64.31	67.62
HORVU6Hr1G077260.1	Barley	cytosol	64.85	67.42
TraesCS2D01G249700.1	Wheat	cytosol	63.49	66.57
VIT_06s0009g00980.t01	Wine grape	cytosol	48.23	55.84
OQU88480	Sorghum	cytosol	48.5	54.43
VIT_08s0032g00700.t01	Wine grape	cytosol	45.5	52.68
KRH32935	Soybean	cytosol	47.41	52.41
EER98018	Sorghum	cytosol	47.96	52.23
EER90762	Sorghum	cytosol	46.87	51.81
KRH68056	Soybean	cytosol	45.5	51.54
KRH71756	Soybean	cytosol	46.32	51.2
VIT_08s0032g00510.t01	Wine grape	cytosol	45.23	51.08
PGSC0003DMT400007788	Potato	cytosol	44.69	50.93
EER98685	Sorghum	cytosol	46.87	50.74
KRG96320	Soybean	cytosol	44.69	50.62
KRH56173	Soybean	cytosol	45.23	50.46
Solyc11g071720.1.1	Tomato	cytosol, extracellular	44.14	50.31
CDY55764	Canola	cytosol	31.88	50.0
CDX81008	Canola	cytosol	45.23	49.7
Bra005899.1-P	Field mustard	cytosol	44.96	49.4
EES00295	Sorghum	mitochondrion, plastid	35.69	49.25
OQU86289	Sorghum	cytosol	43.32	49.07
KRH25344	Soybean	peroxisome	40.87	48.86
EES00296	Sorghum	cytosol	45.23	48.82
CDX70090	Canola	cytosol	44.14	48.8
Bra009207.1-P	Field mustard	cytosol	43.6	48.19
CDX98936	Canola	cytosol	43.6	48.19
AT5G06570.3	Thale cress	cytosol	44.41	47.38
OQU88478	Sorghum	cytosol	42.51	47.13
PGSC0003DMT400022327	Potato	cytosol	31.06	46.15
Solyc11g045460.1.1	Tomato	cytosol	30.52	45.34
EER95156	Sorghum	mitochondrion	36.51	36.02
OQU90362	Sorghum	mitochondrion, plastid	31.34	35.06
OQU86288	Sorghum	mitochondrion	37.87	33.82
KXG36805	Sorghum	cytosol	31.88	33.52
EES18227	Sorghum	cytosol	32.97	33.43
EES08278	Sorghum	plastid	31.61	33.14
EER97518	Sorghum	plastid	30.79	32.75
EES18228	Sorghum	cytosol	31.88	32.23
EES09618	Sorghum	endoplasmic reticulum, vacuole	32.43	31.73
EER99798	Sorghum	plastid	30.52	31.46
OQU90360	Sorghum	mitochondrion	31.61	31.35
EES08277	Sorghum	plastid	29.97	30.81
EES14122	Sorghum	cytosol	28.07	30.21
KXG21982	Sorghum	cytosol	28.34	29.3
EER92547	Sorghum	cytosol	24.25	26.89

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	EntrezGene:8081154	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	UniProt:C5XA92
EnsemblPlants:EER95897	ProteinID:EER95897	ProteinID:EER95897.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	InterPro:IPR029058	PFAM:PF07859	PANTHER:PTHR23024
PANTHER:PTHR23024:SF162	EnsemblPlantsGene:SORBI_3002G042000	SUPFAM:SSF53474	unigene:Sbi.8421	UniParc:UPI0001A82F9E	RefSeq:XP_002459376.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:4013936..4015739

Molecular Weight (calculated)

38977.6 Da

IEP (calculated)

6.127

GRAVY (calculated)

0.078

Length

367 amino acids

Sequence
(BLAST)

001: MPTMPAAVSA ATGVSPPAAA NVVVVEDIYG FLRVLSDGTI LRSPEQPVFC PATFPSSHPS VQWKEEVYDK ANNLRVRMYK PLSTAAGGGG EAGKKLPVLV
101: HFHGGGFCLG SCTWANVHAY CLRLAAEAGA VVLSAGYRLA PEHRLPTAVD DGVGFLRWLR AQSTMDAAAA ADGWLTEAAD FGRVFVTGDS AGGNIAHHLA
201: VRAGLSDTKR GEVDLDLDLR PVTVRGYVLL MPFFGGVRRT PSEAECPAEV LLNLDLFDRF WRLSLPAGGT RDHPAANPFG PDSPELGSVD FRAPVLVVVG
301: GLDMMRDRAV DYAERLAAMG KPVELVEFAG KPHGFYLHEP GSEATGELIG LVSRFLHSCA CDRGAVA

Best Arabidopsis Sequence Match ( AT5G06570.3 )
(BLAST)

001: MTLIHISKTK RERLRMGSLG EEPQVAEDCM GLLQLLSNGT VLRSESIDLI TQQIPFKNNQ TVLFKDSIYH KPNNLHLRLY KPISASNRTA LPVVVFFHGG
101: GFCFGSRSWP HFHNFCLTLA SSLNALVVSP DYRLAPEHRL PAAFEDAEAV LTWLWDQAVS DGVNHWFEDG TDVDFDRVFV VGDSSGGNIA HQLAVRFGSG
201: SIELTPVRVR GYVLMGPFFG GEERTNSENG PSEALLSLDL LDKFWRLSLP NGATRDHHMA NPFGPTSPTL ESISLEPMLV IVGGSELLRD RAKEYAYKLK
301: KMGGKRVDYI EFENKEHGFY SNYPSSEAAE QVLRIIGDFM NNLS

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G06570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.