CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95897	Sorghum	cytosol	82.22	60.49
Zm00001d018853_P001	Maize	cytosol, plastid	72.59	56.81
EER98020	Sorghum	cytosol	65.93	50.86
TraesCS6D01G292900.1	Wheat	cytosol	59.63	46.13
TraesCS2D01G249700.1	Wheat	cytosol	59.63	46.0
TraesCS6B01G343600.1	Wheat	cytosol	59.26	45.85
TraesCS6A01G313200.1	Wheat	cytosol	59.26	45.85
HORVU6Hr1G077260.1	Barley	cytosol	59.26	45.33
EER98021	Sorghum	cytosol, extracellular, peroxisome	60.74	44.44
CDY55764	Canola	cytosol	37.78	43.59
PGSC0003DMT400022327	Potato	cytosol	35.93	39.27
Solyc11g045460.1.1	Tomato	cytosol	34.81	38.06
VIT_06s0009g00980.t01	Wine grape	cytosol	41.48	35.33
OQU88480	Sorghum	cytosol	42.59	35.17
EER98685	Sorghum	cytosol	43.7	34.81
EER90762	Sorghum	cytosol	41.85	34.04
KRH32935	Soybean	cytosol	41.48	33.73
VIT_08s0032g00700.t01	Wine grape	cytosol	39.26	33.44
KRH68056	Soybean	cytosol	40.0	33.33
KRH71756	Soybean	cytosol	40.74	33.13
KRG96320	Soybean	cytosol	39.63	33.02
EER98018	Sorghum	cytosol	41.11	32.94
PGSC0003DMT400007788	Potato	cytosol	39.26	32.92
EES00296	Sorghum	cytosol	41.11	32.65
VIT_08s0032g00510.t01	Wine grape	cytosol	39.26	32.62
Bra005899.1-P	Field mustard	cytosol	40.0	32.34
CDX81008	Canola	cytosol	40.0	32.34
Solyc11g071720.1.1	Tomato	cytosol, extracellular	38.15	31.99
KRH56173	Soybean	cytosol	38.15	31.31
OQU88478	Sorghum	cytosol	38.15	31.12
CDX70090	Canola	cytosol	38.15	31.02
Bra009207.1-P	Field mustard	cytosol	37.78	30.72
CDX98936	Canola	cytosol	37.78	30.72
OQU86289	Sorghum	cytosol	36.3	30.25
AT5G06570.3	Thale cress	cytosol	38.52	30.23
KRH25344	Soybean	peroxisome	32.96	28.99
EES00295	Sorghum	mitochondrion, plastid	26.67	27.07
OQU90362	Sorghum	mitochondrion, plastid	30.0	24.7
EER95156	Sorghum	mitochondrion	33.7	24.46
EES08278	Sorghum	plastid	30.37	23.43
EES18227	Sorghum	cytosol	30.74	22.93
EES09618	Sorghum	endoplasmic reticulum, vacuole	31.48	22.67
KXG36805	Sorghum	cytosol	28.52	22.06
EER97518	Sorghum	plastid	28.15	22.03
EER99798	Sorghum	plastid	28.52	21.63
EES08277	Sorghum	plastid	28.52	21.57
EES18228	Sorghum	cytosol	28.89	21.49
OQU86288	Sorghum	mitochondrion	32.22	21.17
EES14122	Sorghum	cytosol	26.3	20.82
OQU90360	Sorghum	mitochondrion	28.15	20.54
EER92547	Sorghum	cytosol	22.96	18.73
KXG21982	Sorghum	cytosol	24.44	18.59

Protein Annotations

EnsemblPlants:OQU79889	EnsemblPlantsGene:SORBI_3007G041701	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	PANTHER:PTHR23024
PANTHER:PTHR23024:SF162	PFAM:PF07859	ProteinID:OQU79889	ProteinID:OQU79889.1	SEG:seg	SUPFAM:SSF53474
UniParc:UPI000B423B29	UniProt:A0A1Z5R8H9	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:4095642..4096975

Molecular Weight (calculated)

28540.2 Da

IEP (calculated)

9.281

GRAVY (calculated)

-0.009

Length

270 amino acids

Sequence
(BLAST)

001: MPTMPVVSAA TGVSPPAAAN VVVEDIYGFL RVLSDGTILR SPEKPVFCPA TFTSSHPSVQ WKEEVYDKAN NLRVRMYKPL STAGDGEEAG KKLPVLVHFH
101: GGGFFLGSCT WANVHAYCLR LAAEAGAVVL SAEYRLAPEH RLPAAVGDGV GFLRWLHAQS TMDAAAADGW LTEAADFGRV FVTGDSAGGN IAHHLAVRAG
201: PAATKPDLQA RPDLDLRPVT VRGYVLLMPF FGAVRGGRSR GWGRRRAAAA AKGTDAAVGC RGQSACCRRG

Best Arabidopsis Sequence Match ( AT5G06570.1 )
(BLAST)

001: MGSLGEEPQV AEDCMGLLQL LSNGTVLRSE SIDLITQQIP FKNNQTVLFK DSIYHKPNNL HLRLYKPISA SNRTALPVVV FFHGGGFCFG SRSWPHFHNF
101: CLTLASSLNA LVVSPDYRLA PEHRLPAAFE DAEAVLTWLW DQAVSDGVNH WFEDGTDVDF DRVFVVGDSS GGNIAHQLAV RFGSGSIELT PVRVRGYVLM
201: GPFFGGEERT NSENGPSEAL LSLDLLDKFW RLSLPNGATR DHHMANPFGP TSPTLESISL EPMLVIVGGS ELLRDRAKEY AYKLKKMGGK RVDYIEFENK
301: EHGFYSNYPS SEAAEQVLRI IGDFMNNLS

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G06570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.