Factsheet for PGSC0003DMT400007788

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g071720.1.1	Tomato	cytosol, extracellular	95.96	95.96
VIT_06s0009g00980.t01	Wine grape	cytosol	77.33	78.55
KRH56173	Soybean	cytosol	75.16	73.56
KRH25344	Soybean	peroxisome	69.25	72.64
HORVU2Hr1G079270.1	Barley	cytosol	61.8	60.86
Zm00001d018857_P001	Maize	cytosol, extracellular	58.07	57.01
OQU88480	Sorghum	cytosol	57.76	56.88
TraesCS2D01G249500.1	Wheat	mitochondrion, plastid	61.49	53.66
PGSC0003DMT400022327	Potato	cytosol	39.75	51.82
TraesCS2B01G263100.1	Wheat	plastid	61.18	50.51
Os07t0162900-01	Rice	cytosol, peroxisome, plastid	59.01	47.62
Os07t0162500-02	Rice	cytosol, plasma membrane	48.45	47.56
TraesCS2A01G247100.1	Wheat	cytosol	44.1	47.18
Os07t0162400-01	Rice	cytosol, plasma membrane, plastid	47.2	46.48
TraesCS7B01G322700.1	Wheat	cytosol	48.45	46.43
Os07t0162700-01	Rice	cytosol, plastid	50.31	46.15
TraesCS7D01G414500.1	Wheat	cytosol	48.14	46.13
TraesCS5D01G435400.1	Wheat	cytosol	47.83	46.11
Zm00001d018853_P001	Maize	cytosol, plastid	49.38	46.09
Zm00001d013099_P001	Maize	extracellular	48.45	46.02
OQU88478	Sorghum	cytosol	47.2	45.92
EER98020	Sorghum	cytosol	49.69	45.71
HORVU7Hr1G097660.1	Barley	cytosol	47.2	45.65
Zm00001d018848_P001	Maize	cytosol	47.2	45.37
TraesCS5A01G427400.1	Wheat	cytosol	46.89	45.21
EER90762	Sorghum	cytosol	46.58	45.18
HORVU5Hr1G103770.1	Barley	cytosol	47.2	45.1
TraesCS5D01G435500.1	Wheat	cytosol	43.48	45.02
TraesCS5B01G429400.1	Wheat	cytosol	46.58	44.91
EER95897	Sorghum	cytosol	50.93	44.69
TraesCS3D01G132000.1	Wheat	cytosol	40.37	44.37
TraesCS3B01G150400.1	Wheat	cytosol	45.65	44.14
TraesCS6D01G292900.1	Wheat	cytosol	47.83	44.13
TraesCS2D01G249700.1	Wheat	cytosol	47.52	43.71
TraesCS3B01G150200.1	Wheat	cytosol	45.34	43.71
Zm00001d018854_P001	Maize	cytosol	47.52	43.59
TraesCS6A01G313200.1	Wheat	cytosol	47.2	43.55
TraesCS6B01G343600.1	Wheat	cytosol	47.2	43.55
TraesCS3A01G307000.1	Wheat	cytosol	44.1	43.43
TraesCS3B01G150100.1	Wheat	cytosol	44.1	43.43
EER98021	Sorghum	cytosol, extracellular, peroxisome	49.69	43.36
Zm00001d039795_P001	Maize	cytosol	34.78	43.24
HORVU6Hr1G077260.1	Barley	cytosol	47.2	43.06
TraesCS3A01G307100.1	Wheat	cytosol	44.41	42.81
TraesCS3B01G150500.1	Wheat	cytosol	43.48	42.81
TraesCS3A01G131200.1	Wheat	cytosol	45.03	42.77
TraesCS3D01G131900.1	Wheat	cytosol	44.1	42.64
TraesCS4A01G023600.1	Wheat	cytosol, plastid	44.41	42.56
TraesCS3A01G307200.1	Wheat	cytosol	43.17	42.51
TraesCS7A01G422300.1	Wheat	cytosol	48.45	42.51
HORVU3Hr1G024890.2	Barley	cytosol	44.1	42.39
TraesCS3D01G131800.1	Wheat	cytosol	45.34	42.32
TraesCS4D01G278400.1	Wheat	cytosol	44.1	42.26
Os03t0790500-01	Rice	plasma membrane	47.2	42.22
EER98685	Sorghum	cytosol	44.41	42.18
Zm00001d039799_P001	Maize	cytosol	44.41	42.18
EES00295	Sorghum	mitochondrion, plastid	34.78	42.11
TraesCS3B01G150000.1	Wheat	cytosol	42.86	41.69
OQU86289	Sorghum	cytosol	41.93	41.67
TraesCS6B01G429500.1	Wheat	plastid	45.65	41.64
HORVU6Hr1G090630.1	Barley	cytosol, plastid	45.34	41.6
TraesCS6D01G310200.1	Wheat	cytosol	43.48	41.54
Zm00001d007908_P001	Maize	cytosol	44.1	41.52
TraesCS6A01G389700.1	Wheat	plastid	45.34	41.48
TraesCS7B01G363800.1	Wheat	cytosol	44.1	41.4
TraesCS6B01G429700.1	Wheat	plastid	45.34	41.36
Zm00001d018855_P001	Maize	extracellular	47.2	41.3
Zm00001d008635_P001	Maize	cytosol	43.48	41.18
Zm00001d008634_P001	Maize	cytosol	42.24	41.09
TraesCS7D01G450900.1	Wheat	cytosol	42.86	40.95
HORVU3Hr1G024660.1	Barley	cytosol	45.03	40.62
EES00296	Sorghum	cytosol	42.86	40.59
EER98018	Sorghum	cytosol	42.24	40.36
Os01t0155000-02	Rice	cytosol	42.24	40.36
TraesCS3B01G577500.1	Wheat	cytosol	41.93	40.3
TraesCS3D01G516500.1	Wheat	cytosol	41.93	40.3
Zm00001d020032_P001	Maize	peroxisome	42.55	39.6
OQU79889	Sorghum	cytosol	32.92	39.26
Os01t0153800-00	Rice	cytosol	44.72	39.24
Zm00001d007909_P001	Maize	plastid	41.61	39.07
TraesCS6D01G277700.1	Wheat	plastid	44.1	38.9
HORVU0Hr1G022260.2	Barley	mitochondrion	42.86	36.6
PGSC0003DMT400040972	Potato	cytosol	33.54	34.62
PGSC0003DMT400033010	Potato	cytosol	34.78	33.84
PGSC0003DMT400033749	Potato	cytosol	35.4	32.95
PGSC0003DMT400054431	Potato	cytosol	34.16	32.84
PGSC0003DMT400057917	Potato	cytosol	32.61	32.01
PGSC0003DMT400048357	Potato	cytosol	31.68	31.19
PGSC0003DMT400057919	Potato	cytosol	31.68	31.19
PGSC0003DMT400017198	Potato	cytosol	31.37	31.17
PGSC0003DMT400017199	Potato	mitochondrion	31.99	31.02
TraesCS7A01G463000.1	Wheat	mitochondrion, plastid	38.82	30.64
PGSC0003DMT400033220	Potato	cytosol	30.43	30.62
PGSC0003DMT400009831	Potato	cytosol	32.3	30.14
PGSC0003DMT400000390	Potato	cytosol	31.68	30.09
PGSC0003DMT400050566	Potato	cytosol	30.12	29.75
PGSC0003DMT400071863	Potato	cytosol	30.12	29.75
OQU86288	Sorghum	mitochondrion	37.89	29.68
PGSC0003DMT400056562	Potato	cytosol	31.68	29.57
PGSC0003DMT400073501	Potato	cytosol	30.12	27.87
Os07t0162600-02	Rice	cytosol, plasma membrane	0.31	0.3

Protein Annotations

EntrezGene:102593531	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:IPR029058
InterPro:Lipase_GDXG_put_SER_AS	UniProt:M0ZTJ0	PFAM:PF07859	EnsemblPlantsGene:PGSC0003DMG400003009	PGSC:PGSC0003DMG400003009	EnsemblPlants:PGSC0003DMT400007788
ScanProsite:PS01174	PANTHER:PTHR23024	PANTHER:PTHR23024:SF189	SUPFAM:SSF53474	UniParc:UPI000294D8A9	RefSeq:XP_006340439.1

Description

Gibberellin receptor GID1 [Source:PGSC_GENE;Acc:PGSC0003DMG400003009]

Coordinates

chr11:+:43208740..43210362

Molecular Weight (calculated)

36181.1 Da

IEP (calculated)

5.244

GRAVY (calculated)

-0.225

Length

322 amino acids

Sequence
(BLAST)

001: MEDNKYEVEE CRGVLRVYSD GTILRLTKPS FEVPIHDDGS ILWKDVVFQA MYNLQLRLYK PASPISAAKL PVFYYIHGGG FCIGSRTWPN CQNYCFKLAS
101: ELQAVVISPD YRLAPENRLP AAIEDGYAAV KWLQDQAVSD EPDKWLTDVA DFSRVFISGD SAGGNIAHNL AVRLQAGSAE LDPVRVRGYV YLLPFFGGTI
201: RTKFEAEGPK DAFLNIELID RFWRLSIPIG STTDHPLVNP FGPKSPNLEN IDLDPILVLV GGCDLLKDRA KDYANKLKNY GKNIEYVEFE GQQHGFFTID
301: PNSESSKKLM LIIKKFIQDN SS

Best Arabidopsis Sequence Match ( AT5G06570.3 )
(BLAST)

001: MTLIHISKTK RERLRMGSLG EEPQVAEDCM GLLQLLSNGT VLRSESIDLI TQQIPFKNNQ TVLFKDSIYH KPNNLHLRLY KPISASNRTA LPVVVFFHGG
101: GFCFGSRSWP HFHNFCLTLA SSLNALVVSP DYRLAPEHRL PAAFEDAEAV LTWLWDQAVS DGVNHWFEDG TDVDFDRVFV VGDSSGGNIA HQLAVRFGSG
201: SIELTPVRVR GYVLMGPFFG GEERTNSENG PSEALLSLDL LDKFWRLSLP NGATRDHHMA NPFGPTSPTL ESISLEPMLV IVGGSELLRD RAKEYAYKLK
301: KMGGKRVDYI EFENKEHGFY SNYPSSEAAE QVLRIIGDFM NNLS

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G06570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.