Factsheet for Os03t0790500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G435400.1	Wheat	cytosol	67.78	73.05
TraesCS5B01G429400.1	Wheat	cytosol	67.22	72.46
TraesCS5A01G427400.1	Wheat	cytosol	67.22	72.46
EER90762	Sorghum	cytosol	65.56	71.08
TraesCS5D01G435500.1	Wheat	cytosol	60.56	70.1
HORVU5Hr1G103770.1	Barley	cytosol	65.56	70.03
Zm00001d013099_P001	Maize	extracellular	65.28	69.32
TraesCS6D01G310200.1	Wheat	cytosol	63.33	67.66
Os01t0155000-02	Rice	cytosol	51.39	54.9
Os07t0162500-02	Rice	cytosol, plasma membrane	50.0	54.88
Os07t0162400-01	Rice	cytosol, plasma membrane, plastid	48.89	53.82
Os07t0162700-01	Rice	cytosol, plastid	50.28	51.57
Os01t0153800-00	Rice	cytosol	51.94	50.95
VIT_06s0009g00980.t01	Wine grape	cytosol	44.17	50.16
VIT_08s0032g00700.t01	Wine grape	cytosol	43.06	48.9
Solyc11g071720.1.1	Tomato	cytosol, extracellular	42.78	47.83
PGSC0003DMT400007788	Potato	cytosol	42.22	47.2
CDY55764	Canola	cytosol	30.56	47.01
Bra005899.1-P	Field mustard	cytosol	43.61	47.01
CDX81008	Canola	cytosol	43.61	47.01
CDX70090	Canola	cytosol	43.33	46.99
KRH32935	Soybean	cytosol	42.78	46.39
Bra009207.1-P	Field mustard	cytosol	42.78	46.39
CDX98936	Canola	cytosol	42.78	46.39
VIT_08s0032g00510.t01	Wine grape	cytosol	41.67	46.15
KRH56173	Soybean	cytosol	41.94	45.9
KRH68056	Soybean	cytosol	41.11	45.68
KRH25344	Soybean	peroxisome	38.89	45.6
KRG96320	Soybean	cytosol	40.83	45.37
AT5G06570.3	Thale cress	cytosol	42.78	44.77
Solyc11g045460.1.1	Tomato	cytosol	30.28	44.13
Os07t0162900-01	Rice	cytosol, peroxisome, plastid	48.89	44.11
KRH71756	Soybean	cytosol	40.56	43.98
PGSC0003DMT400022327	Potato	cytosol	29.44	42.91
Os08t0547800-01	Rice	cytosol, plasma membrane	33.89	36.97
Os07t0643100-01	Rice	plasma membrane	35.0	36.52
Os12t0135800-01	Rice	cytosol	34.72	34.72
Os05t0410200-01	Rice	plasma membrane	34.72	34.53
Os03t0258200-01	Rice	mitochondrion	35.0	34.33
Os06t0306600-01	Rice	cytosol	34.17	34.17
Os07t0643400-01	Rice	plasma membrane	33.61	34.08
Os07t0643000-01	Rice	plasma membrane	32.78	33.62
Os11t0138900-01	Rice	cytosol, extracellular	32.5	32.87
Os11t0239500-01	Rice	plasma membrane	32.5	31.88
Os07t0643700-01	Rice	cytosol	31.94	31.77
Os07t0606800-01	Rice	plastid	32.22	31.61
Os11t0240600-01	Rice	plasma membrane	30.56	31.34
Os03t0252100-01	Rice	cytosol, peroxisome	30.0	30.95
Os05t0407500-01	Rice	cytosol, nucleus	29.17	29.66
Os12t0135500-00	Rice	cytosol	28.61	29.01
Os07t0162600-02	Rice	cytosol, plasma membrane	1.11	1.19

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	EntrezGene:4334379	ProteinID:ABF99276.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3
EMBL:AK107136	ProteinID:BAF13429.1	ProteinID:BAS86771.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	InterPro:IPR029058	InterPro:Lipase_GDXG_put_SER_AS	EnsemblPlantsGene:Os03g0790500
EnsemblPlants:Os03t0790500-01	PFAM:PF07859	ScanProsite:PS01174	PANTHER:PTHR23024	PANTHER:PTHR23024:SF230	UniProt:Q10C96
SUPFAM:SSF53474	UniParc:UPI0000DB43A4	RefSeq:XP_015628940.1	SEG:seg	:	:

Description

ga insensitive dwarf1, ga insensitive dwarf 1Alpha/beta hydrolase fold-3 domain containing protein. (Os03t0790500-01)

Coordinates

chr3:+:32851444..32852765

Molecular Weight (calculated)

38463.5 Da

IEP (calculated)

4.790

GRAVY (calculated)

-0.017

Length

360 amino acids

Sequence
(BLAST)

001: MSQTELPEST SPSESSPAMA STTPAPYVVE DCGPNLQLFS DGTVIRFEDY NILPPPVLPP ALSTVQWKDV VYDAGRGLKL RVYRPPAATV AGEKLPVLVY
101: FHGGGYFIGS FEMDNFHACC LRLAHELPAV VLSADYRLAP EHRLPAAHDD AATAMSWVRD QAVASGDAAD PWLAESADFG RVFVSGDSAG AGIVHHVALR
201: LGSGQIAVDP ARVAGCALLF PYFGGEERTR SEAEYPPGPF LTLPFSDQGW RLALPRGATR DHPLANPFGP ESPAMDAVAL PPLLVVVAQL DLLRDRDVDY
301: AARLRAMGKQ VEMVEFEGQH HGFFAVEPLG DAGSELVRVV RRFVYGNGGD AAAAAAAASK

Best Arabidopsis Sequence Match ( AT5G06570.3 )
(BLAST)

001: MTLIHISKTK RERLRMGSLG EEPQVAEDCM GLLQLLSNGT VLRSESIDLI TQQIPFKNNQ TVLFKDSIYH KPNNLHLRLY KPISASNRTA LPVVVFFHGG
101: GFCFGSRSWP HFHNFCLTLA SSLNALVVSP DYRLAPEHRL PAAFEDAEAV LTWLWDQAVS DGVNHWFEDG TDVDFDRVFV VGDSSGGNIA HQLAVRFGSG
201: SIELTPVRVR GYVLMGPFFG GEERTNSENG PSEALLSLDL LDKFWRLSLP NGATRDHHMA NPFGPTSPTL ESISLEPMLV IVGGSELLRD RAKEYAYKLK
301: KMGGKRVDYI EFENKEHGFY SNYPSSEAAE QVLRIIGDFM NNLS

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G06570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.