Factsheet for Os07t0643400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 18260611
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G147100.1	Wheat	cytosol	72.11	72.93
TraesCS2B01G168500.1	Wheat	cytosol	71.83	71.43
TraesCS2A01G143500.1	Wheat	cytosol	71.83	71.23
TraesCS2A01G143300.1	Wheat	plastid	68.45	70.43
HORVU2Hr1G025390.1	Barley	mitochondrion	67.61	68.57
TraesCS7B01G058600.1	Wheat	cytosol	68.17	67.98
OQU90362	Sorghum	mitochondrion, plastid	61.69	66.77
Zm00001d022326_P001	Maize	cytosol	60.85	63.34
Os07t0643100-01	Rice	plasma membrane	60.85	62.61
TraesCS2D01G146600.1	Wheat	plastid	68.17	61.58
Os06t0306600-01	Rice	cytosol	62.25	61.39
TraesCS7A01G154600.1	Wheat	nucleus	57.46	57.14
Os07t0643000-01	Rice	plasma membrane	56.34	56.98
Os07t0643700-01	Rice	cytosol	57.46	56.35
Zm00001d022372_P001	Maize	cytosol	38.31	55.28
HORVU2Hr1G025360.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.39	50.66
Os11t0240600-01	Rice	plasma membrane	49.3	49.86
Os11t0239500-01	Rice	plasma membrane	48.73	47.14
Os07t0606800-01	Rice	plastid	44.79	43.32
Os05t0407500-01	Rice	cytosol, nucleus	38.03	38.14
Os07t0162400-01	Rice	cytosol, plasma membrane, plastid	33.24	36.09
Os07t0162500-02	Rice	cytosol, plasma membrane	32.68	35.37
Os03t0790500-01	Rice	plasma membrane	34.08	33.61
Os01t0155000-02	Rice	cytosol	31.55	33.23
Os01t0153800-00	Rice	cytosol	33.52	32.43
Os12t0135800-01	Rice	cytosol	32.39	31.94
Os08t0547800-01	Rice	cytosol, plasma membrane	29.58	31.82
Os07t0162700-01	Rice	cytosol, plastid	31.27	31.62
Os07t0162900-01	Rice	cytosol, peroxisome, plastid	32.96	29.32
Os05t0410200-01	Rice	plasma membrane	29.86	29.28
Os11t0138900-01	Rice	cytosol, extracellular	29.3	29.21
Os03t0258200-01	Rice	mitochondrion	29.3	28.34
Os03t0252100-01	Rice	cytosol, peroxisome	26.48	26.93
Os12t0135500-00	Rice	cytosol	25.92	25.92
Os07t0162600-02	Rice	cytosol, plasma membrane	0.85	0.9

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	EntrezGene:4344081	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	EMBL:AK061012
EMBL:AK109437	ProteinID:BAC19939.1	ProteinID:BAF22355.1	ProteinID:BAT02880.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	InterPro:IPR029058	EnsemblPlantsGene:Os07g0643400
EnsemblPlants:Os07t0643400-01	PFAM:PF07859	PANTHER:PTHR23024	PANTHER:PTHR23024:SF243	UniProt:Q8H5P5	MEROPS:S09.A10
SUPFAM:SSF53474	UniParc:UPI00000AD560	RefSeq:XP_015647845.1	SEG:seg	:	:

Description

Alpha/beta hydrolase fold-3 domain containing protein. (Os07t0643400-01)

Coordinates

chr7:-:26790870..26792040

Molecular Weight (calculated)

38589.8 Da

IEP (calculated)

6.440

GRAVY (calculated)

-0.110

Length

355 amino acids

Sequence
(BLAST)

001: MGHEKEQETA GDELRRPEPP ALPWTVRLQL FALVTAVDIV QRGDGTVNRF LFSLADRQSA AAARPDAHGV RSGDVTVDAS RGLWARVFSP ASSSAVESPP
101: LPVVVYFHGG GFALLTAASS QYDALCRRLC RELRAVVVSV NYRLAPEHRY PAAYDDGVDV LRHLATVGLP ADVVAAVPVD LTRCFLVGDS AGGNIAHHVA
201: HRWAAATTSS SRRVRLAGVV LLQPFFGGEE RTEAELRLDG VGPVVSMARA DWCWRAFLPE GADRDHPAAH VTGENAELAE EFPPAMVVVG GYDTLQDWQR
301: RYAGMLRRNG KAVQVVEYPA AIHSFYVFPE LADSGELVKE MKAFMERNAP PKSNA

Best Arabidopsis Sequence Match ( AT5G23530.1 )
(BLAST)

001: MATDSQPNQK LTLPLKTRIA LTVISTMTDN AQRPDGTINR RFLRLFDFRA PPNPKPVNIV STSDFVVDQS RDLWFRLYTP HVSGDKIPVV VFFHGGGFAF
101: LSPNAYPYDN VCRRFARKLP AYVISVNYRL APEHRYPAQY DDGFDALKYI EENHGSILPA NADLSRCFFA GDSAGGNIAH NVAIRICREP RSSFTAVKLI
201: GLISIQPFFG GEERTEAEKQ LVGAPLVSPD RTDWCWKAMG LNRDHEAVNV GGPNAVDISG LDYPETMVVV AGFDPLKDWQ RSYYEWLKLC GKKATLIEYP
301: NMFHAFYIFP ELPEAGQLIM RIKDFVDERV ASLSA

Arabidopsis Description

CXE18Probable carboxylesterase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9LT10]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.