Factsheet for Os07t0162400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88478	Sorghum	cytosol	77.06	76.13
Zm00001d018848_P001	Maize	cytosol	77.37	75.52
Os07t0162500-02	Rice	cytosol, plasma membrane	58.72	58.54
VIT_06s0009g00980.t01	Wine grape	cytosol	49.54	51.1
Os03t0790500-01	Rice	plasma membrane	53.82	48.89
KRH25344	Soybean	peroxisome	44.95	47.88
Solyc11g071720.1.1	Tomato	cytosol, extracellular	46.79	47.52
PGSC0003DMT400007788	Potato	cytosol	46.48	47.2
VIT_08s0032g00700.t01	Wine grape	cytosol	44.95	46.37
KRH56173	Soybean	cytosol	46.48	46.2
Os07t0162700-01	Rice	cytosol, plastid	49.24	45.87
CDY55764	Canola	cytosol	32.42	45.3
Bra005899.1-P	Field mustard	cytosol	45.87	44.91
KRH32935	Soybean	cytosol	45.57	44.88
CDX81008	Canola	cytosol	45.57	44.61
Os01t0155000-02	Rice	cytosol	45.87	44.51
KRG96320	Soybean	cytosol	43.43	43.83
VIT_08s0032g00510.t01	Wine grape	cytosol	43.43	43.69
KRH71756	Soybean	cytosol	44.34	43.67
CDX70090	Canola	cytosol	44.04	43.37
CDX98936	Canola	cytosol	44.04	43.37
KRH68056	Soybean	cytosol	42.81	43.21
Bra009207.1-P	Field mustard	cytosol	43.43	42.77
Solyc11g045460.1.1	Tomato	cytosol	32.11	42.51
PGSC0003DMT400022327	Potato	cytosol	32.11	42.51
Os07t0162900-01	Rice	cytosol, peroxisome, plastid	51.38	42.11
AT5G06570.3	Thale cress	cytosol	44.04	41.86
Os01t0153800-00	Rice	cytosol	46.18	41.14
Os12t0135800-01	Rice	cytosol	38.53	35.0
Os08t0547800-01	Rice	cytosol, plasma membrane	34.86	34.55
Os11t0138900-01	Rice	cytosol, extracellular	37.31	34.27
Os03t0258200-01	Rice	mitochondrion	38.23	34.06
Os07t0643100-01	Rice	plasma membrane	35.78	33.91
Os05t0410200-01	Rice	plasma membrane	37.0	33.43
Os07t0643400-01	Rice	plasma membrane	36.09	33.24
Os07t0643000-01	Rice	plasma membrane	34.56	32.19
Os06t0306600-01	Rice	cytosol	35.17	31.94
Os12t0135500-00	Rice	cytosol	34.25	31.55
Os07t0643700-01	Rice	cytosol	33.33	30.11
Os11t0239500-01	Rice	plasma membrane	33.64	29.97
Os07t0606800-01	Rice	plastid	33.33	29.7
Os11t0240600-01	Rice	plasma membrane	31.5	29.34
Os05t0407500-01	Rice	cytosol, nucleus	30.58	28.25
Os03t0252100-01	Rice	cytosol, peroxisome	28.44	26.65
Os07t0162600-02	Rice	cytosol, plasma membrane	0.92	0.9

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	EntrezGene:4342460	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	EMBL:AK060082
ProteinID:BAC15963.1	ProteinID:BAD30762.1	ProteinID:BAF20861.1	ProteinID:BAT00175.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	InterPro:IPR029058	InterPro:Lipase_GDXG_put_SER_AS
EnsemblPlantsGene:Os07g0162400	EnsemblPlants:Os07t0162400-01	PFAM:PF07859	ScanProsite:PS01174	PANTHER:PTHR23024	PANTHER:PTHR23024:SF149
UniProt:Q8GSJ3	SUPFAM:SSF53474	UniParc:UPI000005E69E	RefSeq:XP_015645274.1	:	:

Description

Cell death associated protein 1Alpha/beta hydrolase fold-3 domain containing protein. (Os07t0162400-01)

Coordinates

chr7:-:3332889..3334136

Molecular Weight (calculated)

36038.5 Da

IEP (calculated)

5.136

GRAVY (calculated)

-0.237

Length

327 amino acids

Sequence
(BLAST)

001: MAPAAEPYVV EDCRGAVQLM SDGTVRRSAE PAFHVDLPDD ADAAVEWKDV TYDAEHDLNA RLYRPRHLGA ANDARVPVVA YFHGGGFCIG SGRWPNFHAW
101: CLRLAAELPA VVLSFDYRLA PEHRLPAAQE DGATAMAWVR DSAARDPWLA DAADFSRVFV AGDSAGGNIT HHMAVRFGKA GLGPQVRLRG HVLLMPAMAG
201: ETRTRAELEC RPGAFLTAEM SDRYARLILP GGATRDYPVL NPAGPEAPGL EAVAMAPSLV VAAEHDILRD RNEHYARRMR EEWGKEVAFV EFAGEQHGFF
301: EVDPWSERAD ELVRLIRSFV VEHMDSE

Best Arabidopsis Sequence Match ( AT5G06570.1 )
(BLAST)

001: MGSLGEEPQV AEDCMGLLQL LSNGTVLRSE SIDLITQQIP FKNNQTVLFK DSIYHKPNNL HLRLYKPISA SNRTALPVVV FFHGGGFCFG SRSWPHFHNF
101: CLTLASSLNA LVVSPDYRLA PEHRLPAAFE DAEAVLTWLW DQAVSDGVNH WFEDGTDVDF DRVFVVGDSS GGNIAHQLAV RFGSGSIELT PVRVRGYVLM
201: GPFFGGEERT NSENGPSEAL LSLDLLDKFW RLSLPNGATR DHHMANPFGP TSPTLESISL EPMLVIVGGS ELLRDRAKEY AYKLKKMGGK RVDYIEFENK
301: EHGFYSNYPS SEAAEQVLRI IGDFMNNLS

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G06570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.