Factsheet for PGSC0003DMT400022327

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g045460.1.1	Tomato	cytosol	85.83	85.83
CDY55764	Canola	cytosol	53.04	55.98
VIT_08s0032g00700.t01	Wine grape	cytosol	62.35	48.58
VIT_08s0032g00510.t01	Wine grape	cytosol	59.92	45.54
KRH68056	Soybean	cytosol	58.7	44.75
KRG96320	Soybean	cytosol	57.89	44.14
Bra005899.1-P	Field mustard	cytosol	55.06	40.72
CDX81008	Canola	cytosol	55.06	40.72
CDX70090	Canola	cytosol	54.25	40.36
Bra009207.1-P	Field mustard	cytosol	53.85	40.06
CDX98936	Canola	cytosol	53.44	39.76
OQU88480	Sorghum	cytosol	52.63	39.76
PGSC0003DMT400007788	Potato	cytosol	51.82	39.75
HORVU2Hr1G079270.1	Barley	cytosol	51.82	39.14
AT5G06570.3	Thale cress	cytosol	53.44	38.37
Zm00001d018857_P001	Maize	cytosol, extracellular	50.2	37.8
KRH32935	Soybean	cytosol	50.61	37.65
KRH71756	Soybean	cytosol	50.61	37.65
OQU79889	Sorghum	cytosol	39.27	35.93
TraesCS7B01G322700.1	Wheat	cytosol	46.96	34.52
Os07t0162500-02	Rice	cytosol, plasma membrane	45.34	34.15
TraesCS2D01G249500.1	Wheat	mitochondrion, plastid	51.01	34.15
TraesCS7D01G414500.1	Wheat	cytosol	46.15	33.93
TraesCS2B01G263100.1	Wheat	plastid	51.42	32.56
HORVU7Hr1G097660.1	Barley	cytosol	43.72	32.43
OQU88478	Sorghum	cytosol	43.32	32.33
EER90762	Sorghum	cytosol	43.32	32.23
Os07t0162400-01	Rice	cytosol, plasma membrane, plastid	42.51	32.11
TraesCS7A01G422300.1	Wheat	cytosol	47.37	31.88
TraesCS5D01G435500.1	Wheat	cytosol	40.08	31.83
EER98020	Sorghum	cytosol	44.94	31.71
Zm00001d013099_P001	Maize	extracellular	43.32	31.56
TraesCS6B01G343600.1	Wheat	cytosol	44.53	31.52
Zm00001d018848_P001	Maize	cytosol	42.51	31.34
Os07t0162700-01	Rice	cytosol, plastid	44.53	31.34
Zm00001d018853_P001	Maize	cytosol, plastid	43.72	31.3
TraesCS6A01G313200.1	Wheat	cytosol	44.13	31.23
TraesCS6D01G292900.1	Wheat	cytosol	44.13	31.23
TraesCS7B01G363800.1	Wheat	cytosol	43.32	31.2
TraesCS5D01G435400.1	Wheat	cytosol	42.11	31.14
EER95897	Sorghum	cytosol	46.15	31.06
EER98685	Sorghum	cytosol	42.51	30.97
HORVU6Hr1G077260.1	Barley	cytosol	44.13	30.88
TraesCS7D01G450900.1	Wheat	cytosol	42.11	30.86
Zm00001d018854_P001	Maize	cytosol	43.72	30.77
TraesCS6A01G389700.1	Wheat	plastid	43.72	30.68
TraesCS4A01G023600.1	Wheat	cytosol, plastid	41.7	30.65
Os07t0162900-01	Rice	cytosol, peroxisome, plastid	49.39	30.58
TraesCS5A01G427400.1	Wheat	cytosol	41.3	30.54
TraesCS4D01G278400.1	Wheat	cytosol	41.3	30.36
TraesCS6B01G429500.1	Wheat	plastid	43.32	30.31
Os01t0155000-02	Rice	cytosol	41.3	30.27
HORVU6Hr1G090630.1	Barley	cytosol, plastid	42.91	30.2
Zm00001d039795_P001	Maize	cytosol	31.58	30.12
TraesCS6B01G429700.1	Wheat	plastid	42.91	30.03
TraesCS2D01G249700.1	Wheat	cytosol	42.51	30.0
Zm00001d008635_P001	Maize	cytosol	41.3	30.0
Zm00001d020032_P001	Maize	peroxisome	41.7	29.77
TraesCS5B01G429400.1	Wheat	cytosol	40.08	29.64
Zm00001d007908_P001	Maize	cytosol	40.89	29.53
Os03t0790500-01	Rice	plasma membrane	42.91	29.44
Zm00001d007909_P001	Maize	plastid	40.49	29.15
EER98018	Sorghum	cytosol	39.68	29.08
HORVU5Hr1G103770.1	Barley	cytosol	39.68	29.08
TraesCS3D01G516500.1	Wheat	cytosol	38.87	28.66
Zm00001d039799_P001	Maize	cytosol	39.27	28.61
TraesCS3B01G150200.1	Wheat	cytosol	38.46	28.44
Zm00001d008634_P001	Maize	cytosol	38.06	28.4
TraesCS3B01G577500.1	Wheat	cytosol	38.46	28.36
TraesCS3D01G131900.1	Wheat	cytosol	38.06	28.23
TraesCS6D01G277700.1	Wheat	plastid	41.7	28.22
EER98021	Sorghum	cytosol, extracellular, peroxisome	42.11	28.18
TraesCS3A01G307000.1	Wheat	cytosol	37.25	28.13
TraesCS3B01G150400.1	Wheat	cytosol	37.65	27.93
TraesCS3A01G307100.1	Wheat	cytosol	37.65	27.84
EES00295	Sorghum	mitochondrion, plastid	29.96	27.82
Zm00001d018855_P001	Maize	extracellular	41.3	27.72
HORVU0Hr1G022260.2	Barley	mitochondrion	42.11	27.59
TraesCS3B01G150100.1	Wheat	cytosol	36.44	27.52
TraesCS3B01G150500.1	Wheat	cytosol	36.44	27.52
OQU86289	Sorghum	cytosol	36.03	27.47
EES00296	Sorghum	cytosol	37.65	27.35
TraesCS3D01G132000.1	Wheat	cytosol	32.39	27.3
TraesCS2A01G247100.1	Wheat	cytosol	33.2	27.24
TraesCS3A01G307200.1	Wheat	cytosol	36.03	27.22
HORVU3Hr1G024890.2	Barley	cytosol	36.03	26.57
TraesCS3A01G131200.1	Wheat	cytosol	36.03	26.25
TraesCS6D01G310200.1	Wheat	cytosol	35.63	26.11
TraesCS3D01G131800.1	Wheat	cytosol	36.03	25.8
TraesCS3B01G150000.1	Wheat	cytosol	34.41	25.68
PGSC0003DMT400033010	Potato	cytosol	34.01	25.38
Os01t0153800-00	Rice	cytosol	36.84	24.8
HORVU3Hr1G024660.1	Barley	cytosol	35.63	24.65
PGSC0003DMT400033220	Potato	cytosol	31.58	24.38
PGSC0003DMT400033749	Potato	cytosol	34.01	24.28
PGSC0003DMT400054431	Potato	cytosol	32.39	23.88
PGSC0003DMT400048357	Potato	cytosol	31.58	23.85
PGSC0003DMT400050566	Potato	cytosol	31.17	23.62
PGSC0003DMT400071863	Potato	cytosol	31.17	23.62
TraesCS7A01G463000.1	Wheat	mitochondrion, plastid	38.06	23.04
PGSC0003DMT400057917	Potato	cytosol	30.36	22.87
PGSC0003DMT400040972	Potato	cytosol	28.74	22.76
PGSC0003DMT400000390	Potato	cytosol	31.17	22.71
PGSC0003DMT400057919	Potato	cytosol	29.96	22.63
PGSC0003DMT400017198	Potato	cytosol	29.55	22.53
PGSC0003DMT400017199	Potato	mitochondrion	29.96	22.29
PGSC0003DMT400009831	Potato	cytosol	30.77	22.03
PGSC0003DMT400056562	Potato	cytosol	28.74	20.58
PGSC0003DMT400073501	Potato	cytosol	27.13	19.25
OQU86288	Sorghum	mitochondrion	31.98	19.22
Os07t0162600-02	Rice	cytosol, plasma membrane	1.21	0.9

Protein Annotations

EnsemblPlants:PGSC0003DMT400022327	EnsemblPlantsGene:PGSC0003DMG401008665	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	PANTHER:PTHR23024
PANTHER:PTHR23024:SF102	PFAM:PF07859	PGSC:PGSC0003DMG401008665	SUPFAM:SSF53474	UniParc:UPI000295CAB3	UniProt:M1AGJ7
MapMan:35.1	:	:	:	:	:

Description

Gibberellin receptor GID1 [Source:PGSC_GENE;Acc:PGSC0003DMG401008665]

Coordinates

chr11:-:33032596..33033339

Molecular Weight (calculated)

28029.4 Da

IEP (calculated)

5.788

GRAVY (calculated)

-0.198

Length

247 amino acids

Sequence
(BLAST)

001: MGSLPHVVED CLGILQVYSD GSIFRLSDDQ INFHNITVKD DGSVVWKDII YNDRNKDGKE NLYLRLYKPI TTKCITNKQQ LPIIYFFHGG GFCVGSRTWP
101: NCHNCCLRLS SELEALIIAP DYRLAPEYRL PAAMDDAFAS IKWLQHQALS NKITYDADDD SWINHDYDRV YVIGDSSGGN IAHHLALRFG VGSPELAPVR
201: VRGYVLMAPF FGGSVRTKSE EEGPDEPFLN MQILDRYVYL IHILLNP

Best Arabidopsis Sequence Match ( AT5G06570.3 )
(BLAST)

001: MTLIHISKTK RERLRMGSLG EEPQVAEDCM GLLQLLSNGT VLRSESIDLI TQQIPFKNNQ TVLFKDSIYH KPNNLHLRLY KPISASNRTA LPVVVFFHGG
101: GFCFGSRSWP HFHNFCLTLA SSLNALVVSP DYRLAPEHRL PAAFEDAEAV LTWLWDQAVS DGVNHWFEDG TDVDFDRVFV VGDSSGGNIA HQLAVRFGSG
201: SIELTPVRVR GYVLMGPFFG GEERTNSENG PSEALLSLDL LDKFWRLSLP NGATRDHHMA NPFGPTSPTL ESISLEPMLV IVGGSELLRD RAKEYAYKLK
301: KMGGKRVDYI EFENKEHGFY SNYPSSEAAE QVLRIIGDFM NNLS

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G06570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.