Factsheet for Zm00001d007909_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007908_P001	Maize	cytosol	56.27	56.43
Zm00001d013099_P001	Maize	extracellular	54.81	55.46
Zm00001d039795_P001	Maize	cytosol	39.94	52.9
Zm00001d020032_P001	Maize	peroxisome	51.02	50.58
Zm00001d008634_P001	Maize	cytosol	46.94	48.64
Zm00001d018853_P001	Maize	cytosol, plastid	48.4	48.12
Zm00001d018857_P001	Maize	cytosol, extracellular	45.77	47.87
Zm00001d018848_P001	Maize	cytosol	46.65	47.76
Zm00001d008635_P001	Maize	cytosol	47.23	47.65
Zm00001d039799_P001	Maize	cytosol	46.65	47.2
VIT_06s0009g00980.t01	Wine grape	cytosol	42.27	45.74
CDY55764	Canola	cytosol	31.2	45.73
Zm00001d018854_P001	Maize	cytosol	46.65	45.58
Zm00001d018855_P001	Maize	extracellular	48.1	44.84
Bra005899.1-P	Field mustard	cytosol	42.27	43.41
CDX81008	Canola	cytosol	42.27	43.41
CDX70090	Canola	cytosol	41.69	43.07
KRH25344	Soybean	peroxisome	38.48	43.0
Bra009207.1-P	Field mustard	cytosol	41.4	42.77
KRH32935	Soybean	cytosol	41.4	42.77
CDX98936	Canola	cytosol	41.11	42.47
VIT_08s0032g00700.t01	Wine grape	cytosol	39.07	42.27
KRH68056	Soybean	cytosol	39.65	41.98
KRG96320	Soybean	cytosol	39.65	41.98
PGSC0003DMT400007788	Potato	cytosol	39.07	41.61
AT5G06570.3	Thale cress	cytosol	41.69	41.57
VIT_08s0032g00510.t01	Wine grape	cytosol	39.36	41.54
KRH56173	Soybean	cytosol	39.36	41.03
Solyc11g071720.1.1	Tomato	cytosol, extracellular	38.48	40.99
KRH71756	Soybean	cytosol	39.36	40.66
Solyc11g045460.1.1	Tomato	cytosol	29.15	40.49
PGSC0003DMT400022327	Potato	cytosol	29.15	40.49
Zm00001d032036_P001	Maize	extracellular	34.4	35.87
Zm00001d022323_P001	Maize	cytosol, mitochondrion	35.57	35.57
Zm00001d047883_P001	Maize	mitochondrion	37.9	35.14
Zm00001d028440_P001	Maize	peroxisome	33.53	34.74
Zm00001d022326_P001	Maize	cytosol	33.82	34.02
Zm00001d022317_P001	Maize	mitochondrion, plastid	34.4	33.62
Zm00001d007257_P001	Maize	plastid	33.82	33.53
Zm00001d007258_P001	Maize	mitochondrion	34.11	33.14
Zm00001d022320_P001	Maize	plastid	34.11	32.87
Zm00001d022101_P001	Maize	cytosol	29.45	32.69
Zm00001d022327_P001	Maize	plasma membrane	33.53	32.21
Zm00001d038178_P001	Maize	cytosol	33.24	31.75
Zm00001d038177_P001	Maize	cytosol	28.57	30.91
Zm00001d022372_P001	Maize	cytosol	21.87	30.49
Zm00001d010308_P001	Maize	cytosol, plastid	30.9	30.29
Zm00001d010284_P001	Maize	cytosol	32.07	30.05
Zm00001d038165_P003	Maize	cytosol	29.15	28.49

Protein Annotations

EntrezGene:103648262	Gene3D:3.40.50.1820	MapMan:35.1	UniProt:A0A1D6F9X0	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:IPR029058
InterPro:Lipase_GDXG_put_SER_AS	ProteinID:ONM27908.1	PFAM:PF07859	ScanProsite:PS01174	PANTHER:PTHR23024	PANTHER:PTHR23024:SF140
SUPFAM:SSF53474	UniParc:UPI000220E660	EnsemblPlantsGene:Zm00001d007909	EnsemblPlants:Zm00001d007909_P001	EnsemblPlants:Zm00001d007909_T001	SEG:seg

Description

Gibberellin receptor GID1L2

Coordinates

chr2:+:242255125..242256156

Molecular Weight (calculated)

35795.5 Da

IEP (calculated)

5.595

GRAVY (calculated)

0.035

Length

343 amino acids

Sequence
(BLAST)

001: MSSTTTTSPA SGVSGEAPPP RIVEDCLGLV QLMSDGTVKR APASHVLLPD EEPAPPCLAS ADDAASVRCK DVVYDEARNL SLRMYVPSSS RAGNGGAEKL
101: PVLVYFHGGG FIVGSFASPE FHAACARLAA ALPAVVLSAD YRLAPEHRLP AALQDADAIF SWLGAQEQQA AAGGGADPWL ADAADLGRVF VSGDSAGANI
201: AHHAAAAPGR RLAGCVLLWP FFGGERRTRS EAACLGDAFL TLPLYDQMWR LALPAGATRD HPAANPEVGE LPPLLVAAGD RDMLIDRIRE YVARARARAA
301: AAGNRRVDLV EFPGAGHGFA ILEPDGEAAG ELVRVVRRFV HGG

Best Arabidopsis Sequence Match ( AT5G06570.1 )
(BLAST)

001: MGSLGEEPQV AEDCMGLLQL LSNGTVLRSE SIDLITQQIP FKNNQTVLFK DSIYHKPNNL HLRLYKPISA SNRTALPVVV FFHGGGFCFG SRSWPHFHNF
101: CLTLASSLNA LVVSPDYRLA PEHRLPAAFE DAEAVLTWLW DQAVSDGVNH WFEDGTDVDF DRVFVVGDSS GGNIAHQLAV RFGSGSIELT PVRVRGYVLM
201: GPFFGGEERT NSENGPSEAL LSLDLLDKFW RLSLPNGATR DHHMANPFGP TSPTLESISL EPMLVIVGGS ELLRDRAKEY AYKLKKMGGK RVDYIEFENK
301: EHGFYSNYPS SEAAEQVLRI IGDFMNNLS

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT5G06570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.