Factsheet for PGSC0003DMT400048357

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

cytosol: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050566	Potato	cytosol	67.58	67.79
PGSC0003DMT400071863	Potato	cytosol	67.58	67.79
VIT_16s0022g02430.t01	Wine grape	cytosol	29.05	43.78
KRH38655	Soybean	cytosol	40.98	41.36
KRG91413	Soybean	endoplasmic reticulum	42.2	40.95
Bra029278.1-P	Field mustard	cytosol	39.76	40.37
CDX87235	Canola	cytosol, nucleus, plastid	31.8	40.31
Bra035904.1-P	Field mustard	cytosol	40.37	40.24
KRG91414	Soybean	cytosol	40.37	40.12
AT5G62180.1	Thale cress	cytosol	40.06	40.06
VIT_16s0022g02300.t01	Wine grape	cytosol	36.09	40.0
CDY16790	Canola	cytosol	40.06	39.94
KRH09175	Soybean	cytosol, plastid	38.84	39.94
PGSC0003DMT400000390	Potato	cytosol	40.06	38.64
VIT_16s0100g00010.t01	Wine grape	cytosol	38.23	38.34
KRH09176	Soybean	endoplasmic reticulum	29.36	37.65
PGSC0003DMT400017199	Potato	mitochondrion	37.92	37.35
PGSC0003DMT400017198	Potato	cytosol	37.0	37.35
PGSC0003DMT400057919	Potato	cytosol	37.31	37.31
PGSC0003DMT400033220	Potato	cytosol	36.09	36.88
PGSC0003DMT400057917	Potato	cytosol	36.7	36.59
KRH38654	Soybean	cytosol	31.5	35.4
CDY30708	Canola	cytosol	29.36	34.78
Bra029276.1-P	Field mustard	cytosol	28.13	33.7
VIT_16s0022g02440.t01	Wine grape	cytosol	20.8	33.66
PGSC0003DMT400007788	Potato	cytosol	31.19	31.68
PGSC0003DMT400022327	Potato	cytosol	23.85	31.58
PGSC0003DMT400033010	Potato	cytosol	28.44	28.1
KRH38658	Soybean	extracellular	11.93	27.86
PGSC0003DMT400040972	Potato	cytosol	25.99	27.24
PGSC0003DMT400033749	Potato	cytosol	28.75	27.17
PGSC0003DMT400054431	Potato	cytosol	26.3	25.67
PGSC0003DMT400056562	Potato	cytosol	26.91	25.51
PGSC0003DMT400073501	Potato	cytosol	26.91	25.29
PGSC0003DMT400009831	Potato	cytosol	26.61	25.22

Protein Annotations

EnsemblPlants:PGSC0003DMT400048357	EnsemblPlantsGene:PGSC0003DMG400018789	EntrezGene:102580350	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058
MEROPS:S09.A14	PANTHER:PTHR23024	PANTHER:PTHR23024:SF348	PFAM:PF07859	PGSC:PGSC0003DMG400018789	RefSeq:XP_006361622.1
SEG:seg	SUPFAM:SSF53474	UniParc:UPI000295F952	UniProt:M1BMB5	MapMan:35.1	:

Description

Pepper esterase [Source:PGSC_GENE;Acc:PGSC0003DMG400018789]

Coordinates

chr12:-:54812060..54814044

Molecular Weight (calculated)

36972.9 Da

IEP (calculated)

5.402

GRAVY (calculated)

-0.317

Length

327 amino acids

Sequence
(BLAST)

001: MSSQKFVRPI FDNPFFNIEE LPNDTIKRKP EPLIPANSDP NGTSLVISKD VDLDINKKTW LRIYVPRRII ANHDDDKLPV IFYYHGGGFV FFHANSYGWD
101: LFCQALAEKL GAMVIALEYR LAPENRLPAA YEDAIDGLNW IKSTQDEWIR NYSDLSNVYL FGSSSGGNMA YHAGLRVASL SYKELEPVKI KGLILHQPYF
201: SGKNRTESEE KLKDDQLLPL HAIDKMFDLS LPKGTLDHDH EYSNPFLNGG SKHLDDMVTR GWGILVTGVS EDPLVDGARN FANFVEEKGI KTFKLFGDGY
301: HVVELFEPSM AAVLFDATRD FISATKN

Best Arabidopsis Sequence Match ( AT2G45600.1 )
(BLAST)

001: MEAPPPSSDP YKFLNITLNS DGSLTRHRDF PKLPPTEQSK DIPLNQTNNT FIRIFKPRNI PPESKLPILV YFHGGGFILY SAASAPFHES CTKMADRLQT
101: IILSVEYRLA PEHRLPAAYE DAVEAILWLR DQARGPINGG DCDTWLKDGV DFSKCYVMGS SSGGNIVYNV ALRVVDTDLS PVKIQGLIMN QAFFGGVEPS
201: DSESRLKDDK ICPLPATHLL WSLCLPDGVD RDHVYSNPIK SSGPQEKDKM GRFPSTLING YGGDPLVDRQ RHVAEMLKGR GVHVETRFDK DGFHACELFD
301: GNKAKALYET VEAFMKSCSS TGPSSNSNM

Arabidopsis Description

CXE8Probable carboxylesterase 8 [Source:UniProtKB/Swiss-Prot;Acc:O64640]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.