Factsheet for PGSC0003DMT400033220

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g091410.2.1	Tomato	cytosol, unclear	95.0	95.0
KRH48318	Soybean	cytosol	56.56	56.74
KRH65207	Soybean	cytosol	55.62	55.8
Bra004925.1-P	Field mustard	cytosol	52.19	51.54
CDX74752	Canola	cytosol	52.19	51.54
CDY18914	Canola	cytosol	51.88	51.23
AT2G45610.1	Thale cress	cytosol	51.56	50.93
PGSC0003DMT400057917	Potato	cytosol	41.56	40.55
PGSC0003DMT400000390	Potato	cytosol	41.88	39.53
PGSC0003DMT400017198	Potato	cytosol	40.0	39.51
PGSC0003DMT400017199	Potato	mitochondrion	40.62	39.16
PGSC0003DMT400057919	Potato	cytosol	40.0	39.14
PGSC0003DMT400048357	Potato	cytosol	36.88	36.09
PGSC0003DMT400050566	Potato	cytosol	35.94	35.28
PGSC0003DMT400071863	Potato	cytosol	35.94	35.28
PGSC0003DMT400022327	Potato	cytosol	24.38	31.58
PGSC0003DMT400007788	Potato	cytosol	30.62	30.43
PGSC0003DMT400033010	Potato	cytosol	30.0	29.0
PGSC0003DMT400033749	Potato	cytosol	31.25	28.9
PGSC0003DMT400073501	Potato	cytosol	28.44	26.15
PGSC0003DMT400040972	Potato	cytosol	25.31	25.96
PGSC0003DMT400054431	Potato	cytosol	26.56	25.37
PGSC0003DMT400009831	Potato	cytosol	27.19	25.22
PGSC0003DMT400056562	Potato	cytosol	25.62	23.77

Protein Annotations

EnsemblPlants:PGSC0003DMT400033220	EnsemblPlantsGene:PGSC0003DMG400012756	EntrezGene:107062271	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058
PANTHER:PTHR23024	PANTHER:PTHR23024:SF212	PFAM:PF07859	PGSC:PGSC0003DMG400012756	RefSeq:XP_015168191.1	SUPFAM:SSF53474
UniParc:UPI000294A674	UniProt:M1AYS0	MapMan:35.1	:	:	:

Description

Gibberellin receptor GID1 [Source:PGSC_GENE;Acc:PGSC0003DMG400012756]

Coordinates

chr1:-:70798350..70800247

Molecular Weight (calculated)

36089.6 Da

IEP (calculated)

7.190

GRAVY (calculated)

-0.163

Length

320 amino acids

Sequence
(BLAST)

001: MSKFDPYEHL NVVLNQDGSI TRLLDFPTTQ ATGDQNHLPG QAVVSKDITL NEEKKTWMRL YRPSKLPSND KSIAKLPIIV YLHTGGWIHF SVASTIIHES
101: CNQLCSEVPS IVVALDYGLA PENKLPSQYH DTVDAVLWIK NQALDRVNGE KWLREYGDFS RCYLYGVSCG GNIAFNSALK LLNKKLEPLC INGVILNQPL
201: FGGKMRTKSE MRLATDPFFP LPVIDVLWDF ALPKGTDRDH RFCNPMMNGP YRDKINKLGR CLVIGFGGDP LVDRQQEFVQ MLVKEGVMVE ARFDDVGFHG
301: IEVVDSRRAA AIINFVKEFV

Best Arabidopsis Sequence Match ( AT2G45610.1 )
(BLAST)

001: MSRDSPPAFD PYKHLNITIN PNGSCTRHFV WPRVEPDPDP CPGKLAASKD VTINHETGVS VRIFRPTNLP SNDNAVARLP IIIHLHGSGW ILYPANSAAN
101: DRCCSQMASE LTVIVVSVHY RLPPEHRLPA QYDDALDALL WVKQQVVDST NGEPWLKDYA DFSRCYICGS SNGANIAFQL ALRSLDHDLT PLQIDGCVFY
201: QPLFGGKTRT KSELKNFADP VMPVPAVDAM WELSLPVGVD RDHRYCNPLG YLPQKEKVGR LGRCLVIGYG GDTSLDRQQD FVNLLVAAGV RVEARFDDAG
301: FHSIELVDPR RAVALLNMIR DFIS

Arabidopsis Description

CXE9Probable carboxylesterase 9 [Source:UniProtKB/Swiss-Prot;Acc:O64641]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.