Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- nucleus 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G168300.1 | Wheat | mitochondrion | 66.67 | 69.16 |
| TraesCS2A01G143200.1 | Wheat | golgi | 67.5 | 68.84 |
| TraesCS2D01G146500.1 | Wheat | golgi | 67.5 | 68.64 |
| Os07t0643400-01 | Rice | plasma membrane | 61.39 | 62.25 |
| Os07t0643100-01 | Rice | plasma membrane | 55.56 | 57.97 |
| Os07t0643700-01 | Rice | cytosol | 56.39 | 56.08 |
| Os07t0643000-01 | Rice | plasma membrane | 50.28 | 51.57 |
| Os11t0240600-01 | Rice | plasma membrane | 45.83 | 47.01 |
| Os11t0239500-01 | Rice | plasma membrane | 45.83 | 44.96 |
| Os07t0606800-01 | Rice | plastid | 41.94 | 41.14 |
| HORVU2Hr1G025380.7 | Barley | cytosol | 37.78 | 36.96 |
| Os05t0407500-01 | Rice | cytosol, nucleus | 34.72 | 35.31 |
| Os07t0162400-01 | Rice | cytosol, plasma membrane, plastid | 31.94 | 35.17 |
| Os03t0790500-01 | Rice | plasma membrane | 34.17 | 34.17 |
| Os07t0162500-02 | Rice | cytosol, plasma membrane | 30.56 | 33.54 |
| Os07t0162700-01 | Rice | cytosol, plastid | 31.39 | 32.19 |
| Os08t0547800-01 | Rice | cytosol, plasma membrane | 29.17 | 31.82 |
| Os01t0153800-00 | Rice | cytosol | 32.22 | 31.61 |
| Os01t0155000-02 | Rice | cytosol | 29.44 | 31.45 |
| Os07t0162900-01 | Rice | cytosol, peroxisome, plastid | 33.33 | 30.08 |
| Os12t0135800-01 | Rice | cytosol | 29.72 | 29.72 |
| Os03t0258200-01 | Rice | mitochondrion | 28.89 | 28.34 |
| Os05t0410200-01 | Rice | plasma membrane | 27.5 | 27.35 |
| Os03t0252100-01 | Rice | cytosol, peroxisome | 26.39 | 27.22 |
| Os11t0138900-01 | Rice | cytosol, extracellular | 25.83 | 26.12 |
| Os12t0135500-00 | Rice | cytosol | 22.22 | 22.54 |
| Os07t0162600-02 | Rice | cytosol, plasma membrane | 0.56 | 0.6 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.1 | EntrezGene:4340844 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_3 | EMBL:AK106075 |
| ProteinID:BAD62403.1 | ProteinID:BAF19384.1 | ProteinID:BAS97414.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016787 | InterPro:IPR029058 | EnsemblPlantsGene:Os06g0306600 | EnsemblPlants:Os06t0306600-01 |
| PFAM:PF07859 | PANTHER:PTHR23024 | PANTHER:PTHR23024:SF216 | UniProt:Q5Z4C9 | SUPFAM:SSF53474 | SignalP:SignalP-noTM |
| UniParc:UPI000045082D | RefSeq:XP_015641299.1 | SEG:seg | : | : | : |
Description
Alpha/beta hydrolase fold-3 domain containing protein. (Os06t0306600-01);Alpha/beta hydrolase fold-3 domain containing protein. (Os06t0306600-02)
Coordinates
chr6:+:11586343..11587719
Molecular Weight (calculated)
39189.3 Da
IEP (calculated)
6.885
GRAVY (calculated)
-0.216
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MADAHGHRRR VALPCAVRLR LCLLEAAIDA TQRRDGAINR PLFSLYDRRA PADPRPDAAG VSSTDVTVDA SRGLWARVFT PTAPEHEHSS SSSTTTPRPV
101: IVYFHGGGFA MFSAASRPFD THCRTLCAGV GAVVVSVDYR LAPEHRFPAA YDDGEAVLRY LATTGLRDEH GVPVDLSACF LAGDSAGGNI AHHVAQRWTT
201: TSAATPPPPS DNPVHLAGVI LLEPYFGGEE RTKAERALEG VAPVVNIRRS DRWWRAFLPE GADRNHPAAH VTGDAGPEPE LQEAFPPAMV VVGGLDPLQD
301: WDRRYAGMLR RKGKAVRVVE FPEAIHAFYF FPEFAGDIRK LVGEIRAFVE DSIMSKQSIA
101: IVYFHGGGFA MFSAASRPFD THCRTLCAGV GAVVVSVDYR LAPEHRFPAA YDDGEAVLRY LATTGLRDEH GVPVDLSACF LAGDSAGGNI AHHVAQRWTT
201: TSAATPPPPS DNPVHLAGVI LLEPYFGGEE RTKAERALEG VAPVVNIRRS DRWWRAFLPE GADRNHPAAH VTGDAGPEPE LQEAFPPAMV VVGGLDPLQD
301: WDRRYAGMLR RKGKAVRVVE FPEAIHAFYF FPEFAGDIRK LVGEIRAFVE DSIMSKQSIA
001: MAGGNEVNLN ECKRIVPLNT WVLISNFKLA YKVLRRPDGS FNRDLAEFLD RKVPANSFPL DGVFSFDHVD STTNLLTRIY QPASLLHQTR HGTLELTKPL
101: STTEIVPVLI FFHGGSFTHS SANSAIYDTF CRRLVTICGV VVVSVDYRRS PEHRYPCAYD DGWNALNWVK SRVWLQSGKD SNVYVYLAGD SSGGNIAHNV
201: AVRATNEGVK VLGNILLHPM FGGQERTQSE KTLDGKYFVT IQDRDWYWRA YLPEGEDRDH PACNPFGPRG QSLKGVNFPK SLVVVAGLDL VQDWQLAYVD
301: GLKKTGLEVN LLYLKQATIG FYFLPNNDHF HCLMEELNKF VHSIEDSQSK SSPVLLTP
101: STTEIVPVLI FFHGGSFTHS SANSAIYDTF CRRLVTICGV VVVSVDYRRS PEHRYPCAYD DGWNALNWVK SRVWLQSGKD SNVYVYLAGD SSGGNIAHNV
201: AVRATNEGVK VLGNILLHPM FGGQERTQSE KTLDGKYFVT IQDRDWYWRA YLPEGEDRDH PACNPFGPRG QSLKGVNFPK SLVVVAGLDL VQDWQLAYVD
301: GLKKTGLEVN LLYLKQATIG FYFLPNNDHF HCLMEELNKF VHSIEDSQSK SSPVLLTP
Arabidopsis Description
GID1BGibberellin receptor GID1B [Source:UniProtKB/Swiss-Prot;Acc:Q9LYC1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.