CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022101_P001	Maize	cytosol	80.29	89.64
TraesCS2B01G199700.1	Wheat	plastid	73.33	72.7
TraesCS2D01G180600.1	Wheat	plastid	73.33	72.7
TraesCS2A01G173400.1	Wheat	plastid	73.33	72.49
Os07t0606800-01	Rice	plastid	73.91	69.48
HORVU2Hr1G032290.4	Barley	plastid	48.99	55.05
GSMUA_Achr11P...	Banana	cytosol	46.67	52.61
EES08277	Sorghum	plastid	48.41	46.78
EES08278	Sorghum	plastid	47.25	46.57
VIT_18s0089g00370.t01	Wine grape	cytosol	43.77	45.76
VIT_18s0089g00390.t01	Wine grape	endoplasmic reticulum, mitochondrion, plastid	42.03	45.31
VIT_18s0089g00380.t01	Wine grape	mitochondrion	42.9	44.98
KRH09282	Soybean	extracellular	42.9	44.71
KXG36805	Sorghum	cytosol	44.64	44.13
KRH09281	Soybean	plastid	42.9	43.79
VIT_07s0130g00320.t01	Wine grape	plastid	41.74	42.99
KRH38783	Soybean	plastid	41.74	42.73
KRH09280	Soybean	plastid	41.45	42.31
EER99798	Sorghum	plastid	43.48	42.13
VIT_07s0130g00340.t01	Wine grape	plastid	40.87	42.09
Solyc10g054780.1.1	Tomato	nucleus	42.03	41.91
OQU90362	Sorghum	mitochondrion, plastid	39.71	41.77
AT5G23530.1	Thale cress	cytosol	40.29	41.49
VIT_18s0089g00400.t01	Wine grape	mitochondrion	40.58	41.3
Bra026494.1-P	Field mustard	cytosol	40.0	41.19
CDX87169	Canola	cytosol	40.0	41.19
CDY16855	Canola	cytosol	40.0	41.19
CDX80370	Canola	cytosol	39.71	40.9
CDX88032	Canola	cytosol	39.71	40.9
Bra009691.1-P	Field mustard	cytosol	39.13	40.3
KRH38784	Soybean	plastid	41.16	39.34
OQU90360	Sorghum	mitochondrion	40.87	38.11
EER90762	Sorghum	cytosol	34.2	35.54
OQU88480	Sorghum	cytosol	32.46	34.25
EES00295	Sorghum	mitochondrion, plastid	26.09	33.83
EER98685	Sorghum	cytosol	33.04	33.63
EER98020	Sorghum	cytosol	33.91	33.43
EER98018	Sorghum	cytosol	32.17	32.94
OQU88478	Sorghum	cytosol	31.3	32.63
OQU86289	Sorghum	cytosol	30.43	32.41
KXG21982	Sorghum	cytosol	32.75	31.83
EER98021	Sorghum	cytosol, extracellular, peroxisome	33.04	30.89
EER95897	Sorghum	cytosol	32.75	30.79
EES00296	Sorghum	cytosol	29.86	30.29
EER95156	Sorghum	mitochondrion	32.46	30.11
EER92547	Sorghum	cytosol	28.7	29.91
EES18227	Sorghum	cytosol	30.72	29.28
EES14122	Sorghum	cytosol	28.7	29.03
OQU79889	Sorghum	cytosol	22.03	28.15
EES18228	Sorghum	cytosol	29.28	27.82
EES09618	Sorghum	endoplasmic reticulum, vacuole	27.83	25.6
OQU86288	Sorghum	mitochondrion	25.22	21.17

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	EntrezGene:8060665	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	UniProt:C5XDX8
EnsemblPlants:EER97518	ProteinID:EER97518	ProteinID:EER97518.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	InterPro:IPR029058	InterPro:Lipase_GDXG_HIS_AS	PFAM:PF07859
ScanProsite:PS01173	PANTHER:PTHR23024	PANTHER:PTHR23024:SF155	EnsemblPlantsGene:SORBI_3002G370000	SUPFAM:SSF53474	unigene:Sbi.11652
UniParc:UPI0001A838BA	RefSeq:XP_002460997.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:72912799..72914531

Molecular Weight (calculated)

36729.3 Da

IEP (calculated)

6.757

GRAVY (calculated)

-0.117

Length

345 amino acids

Sequence
(BLAST)

001: MAAPDPPPRP GKPPLPWRAR LLVGAASTLH AASLRRDGTV NRFLLSLFDR TAALTPTAPV GGVASTDHAV SDHLHTRIFV PEIPGGGGKE LPVVVYFHGG
101: GFVFHSAASA QFDELCRRLA SAIPAVIASV DYRLAPEHRF PAQYDDGEAA LRWVLAGAGG ALPSPPAAAV FVAGDSAGGN VAHHVAARLP DAVAGLVAVQ
201: PFFSGEAPTE SELRLRDAPF GGPERLAWLW RAFLPPGATR DHEAANVPAA IRRDAGAGDD RWRTFPPTLV CVGGWDVHQD RQRAYADALR AAGAEEVTVA
301: EYPDAIHAFY ILDDLADSKK FVGDVAEFVN RHTSQRKKRA LDHAD

Best Arabidopsis Sequence Match ( AT3G05120.1 )
(BLAST)

001: MAASDEVNLI ESRTVVPLNT WVLISNFKVA YNILRRPDGT FNRHLAEYLD RKVTANANPV DGVFSFDVLI DRRINLLSRV YRPAYADQEQ PPSILDLEKP
101: VDGDIVPVIL FFHGGSFAHS SANSAIYDTL CRRLVGLCKC VVVSVNYRRA PENPYPCAYD DGWIALNWVN SRSWLKSKKD SKVHIFLAGD SSGGNIAHNV
201: ALRAGESGID VLGNILLNPM FGGNERTESE KSLDGKYFVT VRDRDWYWKA FLPEGEDREH PACNPFSPRG KSLEGVSFPK SLVVVAGLDL IRDWQLAYAE
301: GLKKAGQEVK LMHLEKATVG FYLLPNNNHF HNVMDEISAF VNAEC

Arabidopsis Description

GID1AGID1A [Source:UniProtKB/TrEMBL;Acc:A0A178VM30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.