Factsheet for VIT_18s0089g00380.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 4
nucleus 1
plastid 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0089g00390.t01	Wine grape	endoplasmic reticulum, mitochondrion, plastid	84.8	87.19
VIT_18s0089g00400.t01	Wine grape	mitochondrion	75.08	72.86
VIT_18s0089g00370.t01	Wine grape	cytosol	70.21	70.0
VIT_07s0130g00320.t01	Wine grape	plastid	53.5	52.54
VIT_07s0130g00340.t01	Wine grape	plastid	52.58	51.64
TraesCS4D01G087700.1	Wheat	mitochondrion	48.33	46.63
TraesCS4B01G090600.1	Wheat	mitochondrion	48.33	46.63
TraesCS4A01G225700.1	Wheat	mitochondrion	48.33	46.63
HORVU4Hr1G015550.1	Barley	mitochondrion	48.02	46.33
Os11t0240600-01	Rice	plasma membrane	48.63	45.58
Zm00001d007258_P001	Maize	mitochondrion	48.02	44.76
EES08277	Sorghum	plastid	48.02	44.26
EES08278	Sorghum	plastid	46.81	44.0
TraesCS2D01G180600.1	Wheat	plastid	45.9	43.39
Zm00001d007257_P001	Maize	plastid	45.29	43.06
EER97518	Sorghum	plastid	44.98	42.9
TraesCS4A01G224900.1	Wheat	cytosol	44.68	42.86
TraesCS2B01G199700.1	Wheat	plastid	45.29	42.82
TraesCS2A01G173400.1	Wheat	plastid	45.29	42.69
TraesCS4D01G088300.1	Wheat	cytosol	44.38	42.32
TraesCS4B01G091200.1	Wheat	cytosol	44.07	42.03
Zm00001d022101_P001	Maize	cytosol	38.91	41.42
Os11t0239500-01	Rice	plasma membrane	45.29	40.6
Os07t0606800-01	Rice	plastid	44.98	40.33
VIT_16s0022g02440.t01	Wine grape	cytosol	23.1	37.62
TraesCS4A01G225000.1	Wheat	cytosol	34.04	37.21
HORVU4Hr1G015560.1	Barley	plastid	44.07	36.9
VIT_16s0022g02430.t01	Wine grape	cytosol	24.32	36.87
VIT_07s0104g00930.t01	Wine grape	cytosol	37.08	35.47
VIT_16s0100g00010.t01	Wine grape	cytosol	34.35	34.66
VIT_16s0022g02300.t01	Wine grape	cytosol	31.0	34.58
HORVU2Hr1G032290.4	Barley	plastid	31.91	34.2
VIT_14s0030g00440.t01	Wine grape	cytosol	38.6	33.69
VIT_04s0008g05400.t01	Wine grape	cytosol	30.7	32.58
VIT_04s0008g05370.t01	Wine grape	cytosol	30.7	32.58
VIT_04s0008g05410.t01	Wine grape	cytosol	29.79	31.72
VIT_04s0008g05390.t01	Wine grape	cytosol	29.79	31.61
VIT_06s0009g00980.t01	Wine grape	cytosol	30.4	31.55
VIT_15s0048g01390.t01	Wine grape	plastid	31.91	31.25
VIT_04s0008g05360.t01	Wine grape	cytosol, plastid	29.48	31.19
VIT_04s0008g05350.t01	Wine grape	cytosol	29.18	30.97
VIT_08s0032g00510.t01	Wine grape	cytosol	30.4	30.77
VIT_15s0048g01350.t01	Wine grape	cytosol	31.31	30.75
VIT_04s0008g05380.t01	Wine grape	cytosol	28.88	30.74
VIT_08s0032g00700.t01	Wine grape	cytosol	29.48	30.6
VIT_01s0011g03270.t01	Wine grape	cytosol	32.52	30.23
VIT_14s0006g03180.t01	Wine grape	cytosol	31.31	30.12
VIT_08s0040g00960.t01	Wine grape	cytosol	30.09	29.55
VIT_13s0084g00130.t01	Wine grape	cytosol	30.09	29.46
VIT_08s0040g00810.t01	Wine grape	cytosol	29.48	28.12

Protein Annotations

EntrezGene:100855326	wikigene:100855326	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3
ProteinID:CCB44149	ProteinID:CCB44149.1	UniProt:F6GW14	EMBL:FN594956	GO:GO:0000003	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009653	GO:GO:0009856
GO:GO:0009860	GO:GO:0009987	GO:GO:0016043	GO:GO:0016049	GO:GO:0016787	GO:GO:0030154
GO:GO:0040007	GO:GO:0052689	InterPro:IPR029058	EntrezGene:LOC100855326	wikigene:LOC100855326	PFAM:PF07859
PANTHER:PTHR23024	PANTHER:PTHR23024:SF331	SUPFAM:SSF53474	UniParc:UPI00021094F5	ArrayExpress:VIT_18s0089g00380	EnsemblPlantsGene:VIT_18s0089g00380
EnsemblPlants:VIT_18s0089g00380.t01	RefSeq:XP_003634627	RefSeq:XP_003634627.1	:	:	:

Description

No Description!

Coordinates

chr18:+:28167862..28168881

Molecular Weight (calculated)

36714.8 Da

IEP (calculated)

7.138

GRAVY (calculated)

-0.264

Length

329 amino acids

Sequence
(BLAST)

001: MSGTAGGKVR KWPDLPWKVR LFVTAFGFLT DASFRRNGKV NRCLINLIDC KVPPSDRPVN GVTTSDTTVD PSRNLWYRYF VPSAAEAGRM LPVVVYFHGG
101: GFVMLSPSSQ LFDDLCRLLA RELPAVIVSV NYRLAPEHRC PASYEDGVDV LRFIDEKPPA NADLTRCFIV GDSAGGNIAH HVTARAGEHN LRNLQIAGVI
201: PIQPYFGGEE RTESEIQLEG APLVSMKRTD WCWKAFLPEG SDRDHPAANV FGPNSSDISG LRFPKSLVFM GGLDPLRDWQ KRYCGGLKSN GKEVREADYP
301: NAMHSFYAFP ELPESTLFLR ELQDFIYPQ

Best Arabidopsis Sequence Match ( AT3G05120.1 )
(BLAST)

001: MAASDEVNLI ESRTVVPLNT WVLISNFKVA YNILRRPDGT FNRHLAEYLD RKVTANANPV DGVFSFDVLI DRRINLLSRV YRPAYADQEQ PPSILDLEKP
101: VDGDIVPVIL FFHGGSFAHS SANSAIYDTL CRRLVGLCKC VVVSVNYRRA PENPYPCAYD DGWIALNWVN SRSWLKSKKD SKVHIFLAGD SSGGNIAHNV
201: ALRAGESGID VLGNILLNPM FGGNERTESE KSLDGKYFVT VRDRDWYWKA FLPEGEDREH PACNPFSPRG KSLEGVSFPK SLVVVAGLDL IRDWQLAYAE
301: GLKKAGQEVK LMHLEKATVG FYLLPNNNHF HNVMDEISAF VNAEC

Arabidopsis Description

GID1AGID1A [Source:UniProtKB/TrEMBL;Acc:A0A178VM30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.