Factsheet for VIT_04s0008g05360.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 4
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g05390.t01	Wine grape	cytosol	82.64	82.9
VIT_04s0008g05350.t01	Wine grape	cytosol	82.32	82.58
VIT_04s0008g05410.t01	Wine grape	cytosol	76.21	76.7
VIT_04s0008g05370.t01	Wine grape	cytosol	76.21	76.45
VIT_04s0008g05380.t01	Wine grape	cytosol	75.56	76.05
VIT_04s0008g05400.t01	Wine grape	cytosol	75.24	75.48
PGSC0003DMT400040972	Potato	cytosol	63.99	63.78
KRH05152	Soybean	cytosol	62.38	62.78
Solyc08g060930.2.1	Tomato	cytosol	31.51	61.64
VIT_14s0006g03180.t01	Wine grape	cytosol	36.66	33.33
VIT_06s0009g00980.t01	Wine grape	cytosol	33.76	33.12
VIT_16s0022g02300.t01	Wine grape	cytosol	31.19	32.88
VIT_16s0022g02440.t01	Wine grape	cytosol	21.22	32.67
VIT_08s0032g00700.t01	Wine grape	cytosol	33.12	32.49
VIT_08s0040g00960.t01	Wine grape	cytosol	34.41	31.94
VIT_13s0084g00130.t01	Wine grape	cytosol	34.41	31.85
VIT_16s0022g02430.t01	Wine grape	cytosol	22.19	31.8
VIT_08s0032g00510.t01	Wine grape	cytosol	33.12	31.69
VIT_01s0011g03270.t01	Wine grape	cytosol	35.37	31.07
VIT_18s0089g00390.t01	Wine grape	endoplasmic reticulum, mitochondrion, plastid	31.51	30.62
VIT_18s0089g00370.t01	Wine grape	cytosol	32.48	30.61
VIT_16s0100g00010.t01	Wine grape	cytosol	31.83	30.37
VIT_15s0048g01390.t01	Wine grape	plastid	32.48	30.06
VIT_07s0130g00340.t01	Wine grape	plastid	31.83	29.55
VIT_07s0130g00320.t01	Wine grape	plastid	31.83	29.55
VIT_18s0089g00400.t01	Wine grape	mitochondrion	32.15	29.5
VIT_18s0089g00380.t01	Wine grape	mitochondrion	31.19	29.48
VIT_15s0048g01350.t01	Wine grape	cytosol	31.19	28.96
VIT_08s0040g00810.t01	Wine grape	cytosol	30.87	27.83
VIT_07s0104g00930.t01	Wine grape	cytosol	29.58	26.74
VIT_14s0030g00440.t01	Wine grape	cytosol	30.55	25.2

Protein Annotations

EntrezGene:100268028	wikigene:100268028	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3
ProteinID:CCB46796	ProteinID:CCB46796.1	UniProt:F6H318	EMBL:FN595231	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	InterPro:IPR029058	EntrezGene:LOC100268028
wikigene:LOC100268028	InterPro:Lipase_GDXG_put_SER_AS	PFAM:PF07859	ScanProsite:PS01174	PANTHER:PTHR23024	PANTHER:PTHR23024:SF184
SUPFAM:SSF53474	UniParc:UPI00015C836A	ArrayExpress:VIT_04s0008g05360	EnsemblPlantsGene:VIT_04s0008g05360	EnsemblPlants:VIT_04s0008g05360.t01	unigene:Vvi.20532
RefSeq:XP_002285081	RefSeq:XP_002285081.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4:-:4823420..4824458

Molecular Weight (calculated)

34428.8 Da

IEP (calculated)

5.204

GRAVY (calculated)

-0.119

Length

311 amino acids

Sequence
(BLAST)

001: MSVVAEIPGY LQLLSDGSVK RLQQQTSPAS NGSSSNGYKS KDVIINSTKP TSARIFLPDI LGSSSLLPVI VYFHGGGFCV GSTTWLGYHT FLGDLAVASQ
101: SIVLSVDYRL APENRLPIAY DDCYSSLEWL SRQVSSEPWL ERADLSRVFL SGDSAGGNIV HNVALRTIQE QSCDQVKIKG LLIIHPFFGS EERTEKERAS
201: GGEAEVLTWL DLFWKLSLPE GSNCDYSGCN FAMAELSRAE WSRFPPAVVY VAGLDFSKER QVTYAAFLEK KGVEVKLVES EGEIHAYHML HPESEATRLL
301: QKQMSEFIHS F

Best Arabidopsis Sequence Match ( AT5G16080.1 )
(BLAST)

001: MATISFSHNH QSSDNRRGGS HHHRHGPVVE EIEGLIKVFN DGCVERPPIV PIVSPTIHPS SKATAFDIKL SNDTWTRVYI PDAAAASPSV TLPLLVYFHG
101: GGFCVGSAAW SCYHDFLTSL AVKARCVIVS VNYRLAPEHR LPAAYDDGVN VVSWLVKQQI STGGGYPSWL SKCNLSNVFL AGDSAGANIA YQVAVRIMAS
201: GKYANTLHLK GIILIHPFFG GESRTSSEKQ QHHTKSSALT LSASDAYWRL ALPRGASRDH PWCNPLMSSA GAKLPTTMVF MAEFDILKER NLEMCKVMRS
301: HGKRVEGIVH GGVGHAFHIL DNSSVSRDRI HDMMCRLHNF IHPS

Arabidopsis Description

CXE17Probable carboxylesterase 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFR7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.